Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_023579.1 Length=75568 Score E Sequences producing significant alignments: (Bits) Value seq77479 86.0 3e-12 >seq77479 Length=1159 Score = 86.0 bits (94), Expect = 3e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 41170 CAATAGTCCTATAGTTCAGTCGGT-AGAATACCTCCCTGTCACGGAGAAGGTCACGGGTT 41228 |||| |||| ||||||||| ||| |||||| | ||||||||||| || |||| |||||| Sbjct 130 CAATGGTCCGGTAGTTCAGTTGGTTAGAATATCGCCCTGTCACGGCGAGGGTCGCGGGTT 189 Query 41229 CGAGTCCCGTTAGGACTGCCAA 41250 |||||||||| |||| ||||| Sbjct 190 CGAGTCCCGTCCGGACCGCCAA 211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241371278485088