Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17]
109,152 sequences; 80,407,893 total letters
Query= NC_023681.1
Length=152710
Score E
Sequences producing significant alignments: (Bits) Value
seq59922 86.0 6e-12
seq97248 82.4 7e-11
>seq59922
Length=6033
Score = 86.0 bits (94), Expect = 6e-12
Identities = 83/107 (78%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 151100 AATGCATCGGCCAAACCTTGAATGCCTATGCCGATGGGACGATGGCGCATATTAGAtttt 151159
|| ||||| || || ||||||| |||| || || ||||| || ||||| ||||| |||
Sbjct 2786 AAAGCATCTGCTAACCCTTGAACACCTAATCCAATTGGACGGTGACGCATGTTAGAGTTT 2727
Query 151160 tttGCAGTTTCAATAGGGTAGAAATTGCGATCAATAATTTTATTCAA 151206
|| || ||||| |||||||| || | |||||| |||||||||||
Sbjct 2726 TTAGCTTCTTCAACTGGGTAGAAGTTACCATCAATGATTTTATTCAA 2680
>seq97248
Length=461
Score = 82.4 bits (90), Expect = 7e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 137203 ACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCG 137262
|| ||||||| || || ||||| || ||||||||||| | ||| || |||||
Sbjct 391 ACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGATAATGTTCTTCCATCTTCT 332
Query 137263 AGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTA 137322
| ||| || ||||| |||||| | || ||||| || || |||||||||||||| |
Sbjct 331 AATTGCTTTCCAGCGAAGATCAATCTCTGTTGATCTGGTGGGATGCCTTCTTTGTCTTGA 272
Query 137323 ATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTG 137382
|| || || | | || | || |||| | || || || | || | |||||
Sbjct 271 ATCTTAGTCTTGACGTTGTCAATAGTATCTGATTGCTCAACATCTAAGGTAATTGTCTTA 212
Query 137383 CCGGTCAATGTTTTTACGAATATTTGCATA 137412
|| || || || |||||||| |||||||||
Sbjct 211 CCAGTTAAAGTCTTTACGAAGATTTGCATA 182
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 487877430566400
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |