Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_023688.1 Length=222006 Score E Sequences producing significant alignments: (Bits) Value seq104473 91.5 2e-13 seq52410 89.7 7e-13 >seq104473 Length=398 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/82 (85%), Gaps = 2/82 (2%) Strand=Plus/Plus Query 97397 AACTGGTAGCCATGGGCAGGATTGAACTGCCGACCCCACCCTTATCAGGGGTGTGCTCTA 97456 || |||||| | ||||||| |||||||||||||| ||||||||||||||||| |||||| Sbjct 317 AATTGGTAGGCCTGGGCAGATTTGAACTGCCGACCTCACCCTTATCAGGGGTGCGCTCTA 376 Query 97457 --CCACTGAGCTACATGGCTAT 97476 | ||||||||||| | |||| Sbjct 377 ACCAACTGAGCTACAGGCCTAT 398 >seq52410 Length=210 Score = 89.7 bits (98), Expect = 7e-13 Identities = 65/73 (89%), Gaps = 2/73 (3%) Strand=Plus/Plus Query 97409 TGGGCAGGATTGAACTGCCGACCCCACCCTTATCAGGGGTGTGCTCT-ACCA-CTGAGCT 97466 ||||||| |||||||||||||| ||||||||||||||||| ||||| |||| ||||||| Sbjct 1 TGGGCAGACTTGAACTGCCGACCTCACCCTTATCAGGGGTGCGCTCTAACCAGCTGAGCT 60 Query 97467 ACATGGCTATAAA 97479 ||| | ||||||| Sbjct 61 ACAGGCCTATAAA 73 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709322078686720