Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_027344.1 Length=158099 Score E Sequences producing significant alignments: (Bits) Value seq9867 86.0 6e-12 >seq9867 Length=315 Score = 86.0 bits (94), Expect = 6e-12 Identities = 66/77 (86%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 103768 TGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTAACC 103827 |||||| ||| | ||||||||||| ||||||| ||||||||||||| ||||||||||| Sbjct 107 TGGTGGGCCCAGAAGGACTTGAACCTTCGACCAATCGATTATGAGTCGACTGCTCTAACC 166 Query 103828 A-CTGAGCTAAGGGGCC 103843 | |||||||| ||| || Sbjct 167 AGCTGAGCTATGGGCCC 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505098701761280