Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_027991.1 Length=147303 Score E Sequences producing significant alignments: (Bits) Value seq89420 118 1e-21 >seq89420 Length=629 Score = 118 bits (130), Expect = 1e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 58157 TACGTCATGGACAAACTGGATGTGATCCTGCTGATGTCCGTGAACCCAGGCTTCGGCGGC 58216 || || |||||||| | ||| |||| || ||||||| || ||||| || || |||||| Sbjct 406 TATGTAATGGACAAGGTCGATATGATTTTGTTGATGTCGGTAAACCCGGGTTTTGGCGGC 465 Query 58217 CAGTCTTTTATTCCGCAGACGCTGGATAAACTGCGCGAAGTGCGTCGCCGCATTGATGCG 58276 ||||||||||| || |||||||||||| ||||||||| ||| | ||||||| | Sbjct 466 CAGTCTTTTATCCCCTCCACGCTGGATAAATTGCGCGAAGCCCGTGCGCTCATTGATACA 525 Query 58277 TCCGGTTACGACATTCGCCTGGAAGTGGACGGCGGCGT 58314 | || | || ||||||||||| ||||| ||||| || Sbjct 526 TGGGGATTGGATATTCGCCTGGAGGTGGATGGCGGTGT 563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 470598637960960