Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_028659.1 Length=142987 Score E Sequences producing significant alignments: (Bits) Value seq47669 82.4 7e-11 >seq47669 Length=217 Score = 82.4 bits (90), Expect = 7e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 101492 TTTCCCGGTGTACTTGCATCCTGAAACCAAAGAAGAATACGCACTGGCCCGTACTGAGCG 101551 |||||| || | | || |||||||||||||||||||| || || ||||| |||||||| Sbjct 11 TTTCCCCGTCTTTCTTCACCCTGAAACCAAAGAAGAATATGCCCTTGCCCGCACTGAGCG 70 Query 101552 TAAAACTGGTGAAGGCCATACTGGCTTTGAG-ACCTTCTTCAGCCCGGATGTAACTCTGG 101610 ||| |||||| ||| ||| || |||||| || | | || | ||| ||| | | Sbjct 71 AAAATCTGGTGTAGGTTATAAAGGATTTGAGTTTTTTACTGATACCAG-TGTTACTTTAG 129 Query 101611 AAGAGGATTTATCGCGTCGTGACCTGACGATCAATGCGATGGCTAAAGA 101659 | | |||||||| || | || || || || ||||| || || |||| Sbjct 130 AGCAAGATTTATCCCGCAGAGATCTCACTATTAATGCCATCGCAGAAGA 178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 456806281962240