Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq61634 89.7 5e-13 seq104435 82.4 8e-11 >seq61634 Length=3638 Score = 89.7 bits (98), Expect = 5e-13 Identities = 55/59 (93%), Gaps = 0/59 (0%) Strand=Plus/Plus Query 57448 GAAGGATTCGAACCTTCGACCTGCGGATTAGAAGTCCGCTGCTCTATCCAACTGAGCTA 57506 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct 3133 GAAGGATTCGAACCTTCGACCTGATGATTAGAAGTCACCTGCTCTATCCAACTGAGCTA 3191 >seq104435 Length=401 Score = 82.4 bits (90), Expect = 8e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 57446 CAGAAGGATTCGAACCTTCGACCTGCGGATTAGAAGTCCGCTGCTCTATCCAACTGAGCT 57505 |||||||| ||||||||||||||||| ||||| |||| | ||||||| ||||||||||| Sbjct 14 CAGAAGGACTCGAACCTTCGACCTGCCGATTATGAGTCGGATGCTCTAACCAACTGAGCT 73 Query 57506 ATG 57508 ||| Sbjct 74 ATG 76 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531347638780160