Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_028782.1 Length=40024 Score E Sequences producing significant alignments: (Bits) Value seq89519 98.7 3e-16 >seq89519 Length=626 Score = 98.7 bits (108), Expect = 3e-16 Identities = 81/99 (82%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 222 TAGAACATGGCTAGATTAACACCTAAGCAACAAATGTTTGTTAAAGAGTATCTAATTGAC 281 || || |||| || | | || ||||| ||| |||||||||||||||||||| |||||| Sbjct 93 TAAAAAATGGTTAAACTCACGCCTAAACAAGCCATGTTTGTTAAAGAGTATCTTATTGAC 152 Query 282 TTGAACGCAACACAAGCGGCTTTACGTGCTGGCTATAGT 320 || ||||||||||| || ||| | |||||||| |||||| Sbjct 153 TTAAACGCAACACAGGCCGCTATTCGTGCTGGATATAGT 191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127789347028864