Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_028819.1 Length=43190 Score E Sequences producing significant alignments: (Bits) Value seq7002 93.3 1e-14 >seq7002 Length=324 Score = 93.3 bits (102), Expect = 1e-14 Identities = 132/186 (71%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 37422 TGACTTTAAGAATCAAGCCTTTAAATACCTAGTTAACGTATCAGTGTTAACAACGGGCTT 37481 |||||||||||| | || |||||||| ||||||||||||| || | || || ||||| Sbjct 218 TGACTTTAAGAAGAAGGCGTTTAAATATTTAGTTAACGTATCTGTCCTGACGACTGGCTT 159 Query 37482 TGATGCGCCTCACGTTGACGTTATAGCTATTTTGCGAGCTACTGAGTCAGTCGGCTTGAT 37541 |||||| | || || || || || ||||| | || | || ||||| | | ||| Sbjct 158 CGATGCGGCACATGTCGATGTGATCGCTATCCTACGGCCAACGGAGTCGATTAGTTTGTA 99 Query 37542 GCAACAAATAATAGGGCGAGGTTTGCGCCTAGACGATGGTAAAGAGGATTGTTTAGTTTT 37601 || ||||| || || || ||| | || | || | |||| |||||||| | ||||| Sbjct 98 CCAGCAAATCATCGGCCGTGGTCTTCGTTTGGATACAGATAAAAAGGATTGTCTCGTTTT 39 Query 37602 AGACTA 37607 ||| || Sbjct 38 AGATTA 33 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137907415170048