Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_028860.1 Length=52392 Score E Sequences producing significant alignments: (Bits) Value seq61560 87.8 6e-13 >seq61560 Length=3681 Score = 87.8 bits (96), Expect = 6e-13 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 4056 GGTCAGTAGCTCAATTGGTAGAGCAGCGGTTTCCAAAGCCGCTCGTTGGGGGTTCGAGTC 4115 || ||||||||||||||| ||||| |||| |||||| ||| ||||||||||||| || Sbjct 91 GGCCAGTAGCTCAATTGGCAGAGCGACGGTCTCCAAAACCGTAGGTTGGGGGTTCGATTC 150 Query 4116 CCTCCTGGCCTGC 4128 ||||||||||||| Sbjct 151 CCTCCTGGCCTGC 163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167315647335296