Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_028899.1 Length=222888 Score E Sequences producing significant alignments: (Bits) Value seq3912 95.1 2e-14 >seq3912 Length=344 Score = 95.1 bits (104), Expect = 2e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 102573 TCTGGAACCACATCGCCTGCACGTCGGACAACGACCTTATCGCCGATTCGCAGATCTTTA 102632 || |||| ||||||||| || | || |||| ||| | ||||| || || | ||||||| Sbjct 129 TCAGGAATCACATCGCCAGCCCTGCGAACAATAACCGTGTCGCCAATGCGAATATCTTTA 188 Query 102633 CGCCGGATCTCGTCTTCGTTATGCAGTGTTGCGTTGGAAACCCACACACCGCCTACGAAA 102692 ||| || || ||||| || |||| || ||||||| || || ||||| || || Sbjct 189 CGCAACATTTCATCTTCATTGTGCAAGGTGGCGTTGGTCACAGTAACGCCGCCCACAAAG 248 Query 102693 ACGGGCTCTAAGCGGCCC-ACTGGAGTAATGGCCCCCGTTCTACCTACTTGAACATCGAT 102751 || || | ||||| | | || || ||||| || || || ||||| ||||| || || Sbjct 249 ACTGGTT-TAAGCCGTGCGACAGGCGTAATTGCGCCTGTCCTACCCACTTGCACCGTAAT 307 Query 102752 CGCCTCCAGCGTCGTTACAGCCTCTTCTGCGGGGAA 102787 | || | | |||| ||| |||||||||||||| Sbjct 308 ATCTTCTACCAGCGTTGTAGCTTCTTCTGCGGGGAA 343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712140627804160