Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_028945.1 Length=206713 Score E Sequences producing significant alignments: (Bits) Value seq34388 86.0 8e-12 >seq34388 Length=241 Score = 86.0 bits (94), Expect = 8e-12 Identities = 140/201 (70%), Gaps = 8/201 (4%) Strand=Plus/Minus Query 181389 TAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCCGACTTCAAGACC----ACATTC 181444 |||||||||| |||||| || || ||| | || ||| | | || || |||| Sbjct 202 TAGATGTGGGCATCACCCAGCGTGTGGATGAACTCGCCGGCCTTGAGGCCTGTGACAT-- 145 Query 181445 CAGCGCGATCAGATGTGTCAGGAGCGCGTAAGAGGCGATGTTGAAGGGAAGCCCCAAGAA 181504 | || | || |||||||| | ||||| || ||||| |||||||||| |||| ||| Sbjct 144 --GGGCCACCATGTGTGTCAGCAATGCGTAGGAAGCGATATTGAAGGGAACACCCAGGAA 87 Query 181505 GACGTCCACGGACCGCTGATTCCAAAGGCAGGACAGTTTGTCATTGCGAACATAGAACTG 181564 || || | || ||||||| | | |||| ||||| || | | |||||||||||| Sbjct 86 GATATCTGCCGAGCGCTGATACAACTGGCACGACAGCCTGCCGTCAGCAACATAGAACTG 27 Query 181565 GAATCCGTAGTGGCACGGCGG 181585 ||| | | ||||||||||| Sbjct 26 GAACAGGCAATGGCACGGCGG 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 660451249148160