Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_028950.1 Length=223932 Score E Sequences producing significant alignments: (Bits) Value seq3912 118 2e-21 >seq3912 Length=344 Score = 118 bits (130), Expect = 2e-21 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 99224 TCAGGAACCACATCGCCAGCACGACGAACGATCACCTTATCGCCAATTCGCAGACCTTTG 99283 ||||||| |||||||||||| | ||||| || ||| | |||||||| || | | |||| Sbjct 129 TCAGGAATCACATCGCCAGCCCTGCGAACAATAACCGTGTCGCCAATGCGAATATCTTTA 188 Query 99284 CGATGGATTTCATCTTCGTTATGCAGTGTTGCGTTGGAAACCCACACACCGCCCACGAAA 99343 || ||||||||||| || |||| || ||||||| || || |||||||| || Sbjct 189 CGCAACATTTCATCTTCATTGTGCAAGGTGGCGTTGGTCACAGTAACGCCGCCCACAAAG 248 Query 99344 ACGGGCTTCAGGCGCCCCACGGGGGTGATGGCTCCCGTTCTACCTACTTGAACTTCAATC 99403 || || || || || | || || || || || || || ||||| ||||| || ||| Sbjct 249 ACTGGTTTAAGCCGTGCGACAGGCGTAATTGCGCCTGTCCTACCCACTTGCACCGTAATA 308 Query 99404 GCCTCTAGCGTCGTTACAGCCTCTTCTGCAGGGAA 99438 | |||| | |||| ||| |||||||| ||||| Sbjct 309 TCTTCTACCAGCGTTGTAGCTTCTTCTGCGGGGAA 343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715476869616640