Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_028957.1 Length=171541 Score E Sequences producing significant alignments: (Bits) Value seq42898 82.4 8e-11 >seq42898 Length=225 Score = 82.4 bits (90), Expect = 8e-11 Identities = 91/119 (76%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 140796 TTCATCACGGGCGATGAACTTCATTATCTTCGCATTGCCTTCCATGATTTCCATGTTCTT 140855 ||||||||| || || ||||| |||||||||||||||||||| | | || | |||| Sbjct 33 TTCATCACGCGCTATTAACTTAATTATCTTCGCATTGCCTTCAAGCAATT-CGCGTTC-- 89 Query 140856 ATGGAAGTTGAAAGTACAAGCAAAAGATACATAAAAACGAATGGCTTCCAGCGCATTAA 140914 | || |||| ||||||||| |||||||| || |||||||| |||||||||| Sbjct 90 AGCAAAAGCAAAAGAACAAGCAAAGCTAACATAAAATCGGATGGCTTCAAGCGCATTAA 148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548054412913920