Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_031077.1 Length=41760 Score E Sequences producing significant alignments: (Bits) Value seq48149 95.1 3e-15 >seq48149 Length=216 Score = 95.1 bits (104), Expect = 3e-15 Identities = 97/125 (78%), Gaps = 4/125 (3%) Strand=Plus/Minus Query 29627 CACGACCTGCGCCGCACTGCCAGCACGCTGTTGCATGAAGCTGGCTATCCATCA--GACT 29684 |||||| ||||||||||||| || ||||| | ||||| ||||| || || || || | Sbjct 124 CACGACTTGCGCCGCACTGCTAGTACGCTACTTCATGAGGCTGGTTA--CAACACTGATT 67 Query 29685 GGATTGAAAAGGCGCTGGCGCATGAACAGAAGGGCGTGCGTGCGGTGTACAACAAAGCGG 29744 ||||||| ||| || || ||||| |||||||||||| | || || ||||| ||||| | Sbjct 66 GGATTGAGAAGTGCCTTGCTCATGAGCAGAAGGGCGTGAGGGCTGTCTACAATAAAGCTG 7 Query 29745 AGTAC 29749 | ||| Sbjct 6 AATAC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133337346489728