Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_031280.1 Length=104906 Score E Sequences producing significant alignments: (Bits) Value seq60379 86.0 4e-12 >seq60379 Length=4852 Score = 86.0 bits (94), Expect = 4e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 70379 CCACCATGTCATACACTATTCCAATTCTTTGTGGAAGATGGTAAGCTTTCTTGCCAGCTA 70438 || ||||||||| || || || || | ||| | || || |||||||| |||||||| Sbjct 1633 CCGCCATGTCATTGTCTGTTTCAGTTTTATGTCGCGGACGGCAAGCTTTCATGCCAGCTC 1574 Query 70439 TATCAACGTAGTGCTGACATTTTACTTGGTGTGCCATTCAATATTGCATCATATGCCTTA 70498 ||||| ||| || || || || | ||||||||||||||||| || || ||||| | Sbjct 1573 TATCAGCGTTCGGCGGATATCTTTTTAGGTGTGCCATTCAATATCGCGTCCTATGCGCTT 1514 Query 70499 CTTACACATCTTATTGC 70515 ||||| || | ||||| Sbjct 1513 CTTACGCACATGATTGC 1497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335127988731424