Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq23 84.2 5e-11 >seq23 Length=179919 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/187 (71%), Gaps = 9/187 (5%) Strand=Plus/Minus Query 230441 GTCG-CCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGAC 230499 |||| ||| || || ||||||| | ||| |||| || ||| | |||| ||| || || Sbjct 161411 GTCGACCTCATCGGAATGAACGGCGTACTCATGGCCCAATACCTAGAATACGTGGCAGAT 161352 Query 230500 CGCATTTT----TGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGC 230555 || || | ||| || ||||||| ||| | |||||| ||| |||||||| | Sbjct 161351 CGACTTCTCCAATGT----CTGGGTTACGGAAAACTATACAACACTACCAACCCCTTCGA 161296 Query 230556 ATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGA 230615 | |||||| | || || ||||||| || ||||||||||||||||| | || | || Sbjct 161295 CTGGATGGAGATGATCTCAGTTCAAGGAAAAACCAACTTCTTCGAAAAAAGAGTTGGAGA 161236 Query 230616 CTATCAG 230622 ||| ||| Sbjct 161235 CTACCAG 161229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057817643469470