Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq275 104 3e-17 >seq275 Length=98564 Score = 104 bits (114), Expect = 3e-17 Identities = 407/631 (65%), Gaps = 12/631 (2%) Strand=Plus/Minus Query 145646 TGGGAAAGGGCCGGGG-GCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGG 145704 ||||||| || | || |||| |||| | ||| ||| || || | | |||||| | Sbjct 82777 TGGGAAACGGTCTTGGCGCTC-TGGTAAACTGTTCCTTGAGAGGTTGTAAGTGGTTCTTG 82719 Query 145705 TAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGG 145764 ||||| || |||| ||| || ||||| || ||| |||| | ||| || ||||| Sbjct 82718 TAGACATGAGCGTTTGCCACGAAGTGGACAAATTCCTTCGGCTTGTAGCCAGTAAGGTGC 82659 Query 145765 GCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATG 145824 | | || ||| ||| || ||||||||||| |||||||| || | || || ||| | Sbjct 82658 CCTATAATATAGCACAGTAGTGAGTAGCTGGCGATGTTGAACGGAATTCCGAGTCCCCAG 82599 Query 145825 TCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTC----CCCGCCCG--CCACGTAGAAC 145878 || || || || || || || ||| || | ||| | | | | ||||| ||| Sbjct 82598 TCGCCTGAACGTTGATAAAGAGCGCATGAAATCTCTTTTCTCATCGGATCCACGACAAAC 82539 Query 145879 TGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCG 145938 |||| || || ||||||||| || ||||||||| | || | ||||| ||||| || Sbjct 82538 TGGCTCAAGACGTGGCAGGGAGGTAGGGCCATGTCCTTGAGAGCGGCCGGATTCCAAGCC 82479 Query 145939 GTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGC 145998 | | || | | | || ||| |||| | ||| || ||| | || || | Sbjct 82478 GAAATGATGTGTCGCCGACTCACGGGATCTTGCTTTATGTCCTTAAGCAAAGTTTGGACC 82419 Query 145999 TGGTCCACGCCCTGC-CCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTG 146057 |||||||| |||||| || || || | | ||||| || | ||||| || || Sbjct 82418 TGGTCCAC-CCCTGCACCTTTATAGTCGCAGTCACAATCCACATAATCAGCCCCAAAATG 82360 Query 146058 CCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAG-CCCGG 146116 | ||| ||||| || || || || |||| || || | || || || ||| | Sbjct 82359 TCGCCATTGGAATCCATAAACCGGACCCAAATCACCTTCGCGTCGATGACCAAGACCCCG 82300 Query 146117 CCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGA 146176 | | | ||||| ||| | ||||||| | ||||| || | ||| | |||||| | Sbjct 82299 CTTAGTC-AGGAATTCCTTCGTCCCGTTGCCATCCCAAATGTGCACGTTCTTCGCGGCCA 82241 Query 146177 GCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCC 146236 | ||| |||||| | ||| | | |||||| | ||| || || | || ||| ||| Sbjct 82240 ATTTCTTGCCGTCCGTACAGCCCTTTAGGAACCATAACAGTTCCTCAACCACGCCCTTCC 82181 Query 146237 AGAAGACCCTCTTGGTGGTCAGCAGGGGGAA 146267 || | || | || || |||| || ||||| Sbjct 82180 AGTAAACTTTTTTAGTCGTCAACAACGGGAA 82150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073340674760