Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 2e-13 >seq19 Length=197207 Score = 91.5 bits (100), Expect = 2e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || ||| | ||||| |||| || || || || ||| | ||| | ||| | | Sbjct 102474 ATGCAGATCTTTGTTAAGACTTTAACTGGGAAGACGATTACTCTGGAGGTGGAACCTACG 102415 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 ||| | || || | || || ||||| || || ||||| || || |||||||| Sbjct 102414 GATTCTGTTGATACGGTGAAGGCTAAGATTCATGACAAGGAAGGCATCCCTCCTGATCAG 102355 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | || |||||||| || || ||||| ||||| || | || ||| ||||||||| Sbjct 102354 CAGCGTCTGATTTTTGCTGGTAAGCAATTGGAGGAGGGTAGGACGTTATCGGATTATAAT 102295 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768 || || |||||| || ||||| | || | ||||| |||| || || Sbjct 102294 ATCCAGAAAGAAAGTACGTTGCACCTTGTGCTGCGTTTGAGAGGAGGAAT 102245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755451571139200