Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 8e-13 >seq1 Length=711979 Score = 89.7 bits (98), Expect = 8e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| ||||| | || | || | ||||| || || || || ||||| ||| Sbjct 179558 CCGCCTCTGAGTCTGAGGACAAGGTGGATGGTAGACTCCTTCTGGATGTTGTAATCCGAA 179617 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 ||||| | || |||||| |||||||| || || || ||||| | || |||||||||||| Sbjct 179618 AGAGTGCGGCCATCATCCAATTGTTTGCCGGCGAATATCAAGCGCTGTTGATCCGGAGGA 179677 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| ||||| || Sbjct 179678 ATGCCTTCCTTATCCTG 179694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743522041076480