Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq19 95.1 8e-15 >seq19 Length=197207 Score = 95.1 bits (104), Expect = 8e-15 Identities = 158/226 (70%), Gaps = 8/226 (4%) Strand=Plus/Plus Query 34177 CAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTC 34236 |||||| ||||| || |||||||||||||| || || || || || | | | | || Sbjct 102262 CAGCACAAGGTGCAACGTACTTTCTTTCTGGATATTATAATCCGATAACGTCCTACCCTC 102321 Query 34237 GTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTC 34296 ||||| ||||| || || ||||| || |||||||| || || | || |||||||| Sbjct 102322 CTCCAATTGCTTACCAGCAAAAATCAGACGCTGCTGATCAGGAGGGATGCCTTCCTTGTC 102381 Query 34297 GGCTATCTTTTGCTTTAGATCGGCTATC----GAATCGGTCGATTCGACGTCCACCGTGA 34352 ||||| ||| | || |||| ||||| || | ||| || |||| || | Sbjct 102382 ATGAATCTTAGCCTT--CACCG--TATCAACAGAATCCGTAGGTTCCACCTCCAGAGTAA 102437 Query 34353 TGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCATCGCTCGAAT 34398 | || || || || | ||| || ||||||||||||||| ||| ||| Sbjct 102438 TCGTCTTCCCAGTTAAAGTCTTAACAAAGATCTGCATCTCTCAAAT 102483 Score = 89.7 bits (98), Expect = 3e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||| ||||| | || ||||| ||||| |||||||| ||||||| | | | || Sbjct 102035 AGCACAAGGTGCAGTGTGCTTTCCTTCTGAATGTTGTAATCGGACAACGTTCTACCTTCA 102094 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||| ||||| |||||||| || ||||| || || || | || |||||||| Sbjct 102095 TCGAGCTGTTTGCCCGCGAAAATCAGACGCTGTTGATCAGGAGGGATGCCTTCCTTGTCC 102154 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | || | |||| || || | || || |||| || || || Sbjct 102155 TGAATCTTGGCCTTAACAACGTCAATCGTGTCCGTGGGCTCCACTTCCAGGGTAATCGTC 102214 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || || | || || |||||||||||||| Sbjct 102215 TTACCAGTTAACGTCTTGACAAAGATCTGCAT 102246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070153340640