Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq275 102 2e-16 >seq275 Length=98564 Score = 102 bits (112), Expect = 2e-16 Identities = 155/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 35234 ACTACCAAGAAAATTTTCTGGAGAGGAGTTGTGGAAGAACTCTCGTGGTTCATCAGGGGC 35293 || || || ||| ||| ||||| || || || || ||||| | |||||| | | |||| Sbjct 82162 ACGACTAAAAAAGTTTACTGGAAGGGCGTGGTTGAGGAACTGTTATGGTTCCTAAAGGGC 82221 Query 35294 AATACAGACGCCAAAGAATTGGCCAAGAAGAAGATACACATCTGGAACGCTAATGGGTCG 35353 ||| |||| ||| |||||||| |||||| | ||||| ||| | | || ||| || Sbjct 82222 TGTACGGACGGCAAGAAATTGGCCGCGAAGAACGTGCACATTTGGGATGGCAACGGGACG 82281 Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACG--ATAGAGCAGAGGGAGATTTGGGACCCG 35411 |||||| || | || ||| | | | || || || || |||||||| || | Sbjct 82282 AAGGAATTCCTGACTA--AGCGGGGTCTTGGTCATCGACGCGAAGGTGATTTGGGTCCGG 82339 Query 35412 TATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATG 35450 | || |||||||||||||| |||||||| ||||| |||| Sbjct 82340 TTTATGGATTCCAATGGCGACATTTTGGGGCTGATTATG 82378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989578053527895