Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 3e-15 >seq9 Length=285593 Score = 96.9 bits (106), Expect = 3e-15 Identities = 374/585 (64%), Gaps = 2/585 (0%) Strand=Plus/Minus Query 37968 TCCTGGACATTCGCATGGACACATTAGAGACCATTCTTCATCTTTTTCTACGCGTTCCAT 38027 ||| |||||| | |||||||||| | ||| | |||| || ||| | |||||| Sbjct 70930 TCCAGGACATAAGTGAGGACACATTAAACTCCAAGCACCATCAGATTGTACTCTTTCCAT 70871 Query 38028 AAATAAATCAGGTACCCATAATGCAGTAAATAAATCTTTGGTTCTATATTCTTCGTTCCC 38087 |||| || | || ||||| || |||||| ||| | | ||| | |||||| || || Sbjct 70870 GAATAGGTCGGATATCCATAGAGCTAGAAATAAGTCTCTTGCTCTCTGTTCTTCTTTACC 70811 Query 38088 TACATTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAAT 38147 ||||| | | | ||| ||||| | |||||| |||||||| || | || || Sbjct 70810 ATGGTTCTTCCGGAGTTCAATAAAGTCGAACACATCAGCATGCCATGGCTCCAAGTAGAT 70751 Query 38148 CGACATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATA 38207 | | || || | ||| ||||||| || | | ||| | | | || ||| | Sbjct 70750 TGCGAATGAGCCCTTGCGTTTGCCACCTCCTTGGTCTACATAGCGAGCACAGTCATTGAA 70691 Query 38208 TATTCTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACC 38267 | ||| | ||| || | || || || | | | || || | || | || ||||| || Sbjct 70690 AACTCTGAGCATTGGAATGATTCCGTTCGCTCTTCCATTGGTTCCCGCAATGTAAGTTCC 70631 Query 38268 CTTAGCTCGTATATTACTTATCGACAATCCTATT-CCACCTGCATGTTTTGATATTAAAG 38326 |||| | | ||| | | | ||| || | | || ||||||| ||| || | | Sbjct 70630 TGTAGCCCTGACTTTA-TGAACTGCAAGCCCAATACCTCCTGCATATTTGCTGATGAGTG 70572 Query 38327 CGCATTGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAA 38386 ||||| |||||| || |||||||||||| | ||||| || || ||| | || | | Sbjct 70571 CGCATGATTTTAATGTCTCAAATATACCTGCGATACTATCCTCTGCCATTTGCAGAAGGA 70512 Query 38387 AACAACTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTA 38446 |||| ||||| ||||| || || || || || || || ||||| | ||||| Sbjct 70511 AACAGGAGGACATCTGAGGTCTTGCCGTCCCTGCATTGAACAAGGTAGGGGTAGCATGAG 70452 Query 38447 TGAACCATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGT 38506 | || | |||| | || | || | ||| | ||| || | || || | | Sbjct 70451 TAAAGAACTTTTGTGTCATTAGCTCGTAACTCTCTCTAACACTTTCCAAGTCCCCACAAT 70392 Query 38507 GAATACCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTCTA 38551 | ||||| || |||||||| | ||||||||| |||||||||| Sbjct 70391 GGATACCACAAGCTACCCTCAAGAACATATGTTGGGGTCTTTCTA 70347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468522053273360