Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq23 93.3 6e-14 >seq23 Length=179919 Score = 93.3 bits (102), Expect = 6e-14 Identities = 115/155 (74%), Gaps = 2/155 (1%) Strand=Plus/Minus Query 125418 GCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAGTTTTGC 125476 ||||| |||| | | ||| ||| || || |||||||| ||||| || | |||||| Sbjct 161678 GCCGAACGACTACTAGGATTTTGCGCAGTCGAAGGCATCTTATTTTCTGGCTCTTTTTGC 161619 Query 125477 GGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTT 125536 | ||||||| ||| ||||||| || |||||| ||||||| || || ||| ||||| | Sbjct 161618 G-CCATCTTCTGGTTCAAGAAACGTGGACTCTTGCCCGGCCTCACCTTCAGCAACGAACT 161560 Query 125537 TATATCTCGAGACGAGGGCCTACACTGTGACTTTG 125571 || || | ||||||||||| ||| ||||||| Sbjct 161559 CATTTCAAGGGACGAGGGCCTCCACACCGACTTTG 161525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741054855540440