Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq19 82.4 6e-11 >seq19 Length=197207 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19980 TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGC 20039 |||| |||| || | | ||| | || ||||| ||| || || |||||||||||| Sbjct 102018 TTCCACCTCTCAAACGGAGCACAAGGTGCAGTGTGCTTTCCTTCTGAATGTTGTAATCGG 102077 Query 20040 CCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGG 20099 || ||| || || || | ||||||||||| |||| || | ||||||||| | Sbjct 102078 ACAACGTTCTACCTTCATCGAGCTGTTTGCCCGCGAAAATCAGACGCTGTTGATCAGGAG 102137 Query 20100 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCG 20159 | | |||||| ||||| ||| || || || | ||| | || || ||| Sbjct 102138 GGATGCCTTCCTTGTCCTGAATCTTGGCCTTAACAACGTCAATCGTGTCCGTGGGCTCCA 102197 Query 20160 TTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 ||||| |||||| || || || || ||||| |||||||| || |||||| Sbjct 102198 CTTCCAGGGTAATCGTCTTACCAGTTAACGTCTTGACAAAGATCTGCATT 102247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419584801665789