Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq19 82.4 6e-11 >seq19 Length=197207 Score = 82.4 bits (90), Expect = 6e-11 Identities = 142/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583 || |||||||| ||||| |||||||||||||| | ||| || | || || ||||| Sbjct 102044 TGCAGTGTGCTTTCCTTCTGAATGTTGTAATCGGACAACGTTCTACCTTCATCGAGCTGT 102103 Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643 || || || |||| | |||||| ||||| || | | |||||||||| ||| || Sbjct 102104 TTGCCCGCGAAAATCAGACGCTGTTGATCAGGAGGGATGCCTTCCTTGTCCTGAATCTTG 102163 Query 48644 TGCTTGATAGACG-CTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGT 48702 ||| | | ||| | || || || || | |||| || | || || || ||||| || Sbjct 102164 GCCTTAACA-ACGTCAATCGTGTCCGTGGGCTCCACTTCCAGGGTAATCGTCTTACCAGT 102222 Query 48703 GAGAGTTTTCACAAAAATCTGCAT 48726 | || || ||||| |||||||| Sbjct 102223 TAACGTCTTGACAAAGATCTGCAT 102246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421248792154469