Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq19 104 2e-17 seq23 86.0 6e-12 >seq19 Length=197207 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 ||||||| | || || ||||| || ||||| || |||| || ||||| | ||| ||| Sbjct 102019 AATGCAAATCTTCGTCAAAACCTTGACTGGCAAGACGATTACTCTCGAAGTCGAACCAAC 101960 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 ||| | |||| || || |||||| ||||||||||| || || || || || Sbjct 101959 GGACTCTGTCGATACCGTTAAGGCCAAGATTCAAGACAAAGAAGGTATTCCCCCGGACCA 101900 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAG-CGACTATA 26946 ||| | || |||| || || || ||||| || || | | | || | || ||| || | Sbjct 101899 ACAGCGTCTGATTTTCGCTGGTAAGCAACTGGATGAGGGTCG-GACATTAGCCGATTACA 101841 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| || |||||| ||||| ||||| ||| ||||||| |||||||| Sbjct 101840 ACATCCAGAAAGAAAGCACTATTCATCTCGTCTTGAGACTGAGAGGAGG 101792 >seq23 Length=179919 Score = 86.0 bits (94), Expect = 6e-12 Identities = 103/135 (76%), Gaps = 10/135 (7%) Strand=Plus/Plus Query 119944 CAAAGTCGGTGTGTAGTCCTTCGTCTCTGGAAATGAGTTCGTTGCTGTAAGTCAAGCCGG 120003 ||||||||||||| || || ||||| || |||||||||||||||||| | || | ||||| Sbjct 161525 CAAAGTCGGTGTGGAGGCCCTCGTCCCTTGAAATGAGTTCGTTGCTGAAGGTGAGGCCGG 161584 Query 120004 G-TAGAGCTCCTTTTTTCGAGTCTTTGATATAGTAGATTGCAGCAAAACTA-CCAGaaaa 120061 | |||| ||| |||| |||| || |||| || |||||| | |||||||| Sbjct 161585 GCAAGAG-TCCACGTTTC------TTGAACCAGAAGATGGC-GCAAAAAGAGCCAGAAAA 161636 Query 120062 aaaGACGCCTTCGAC 120076 |||| ||||||||| Sbjct 161637 TAAGATGCCTTCGAC 161651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659593841680