Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq23 86.0 7e-12 >seq23 Length=179919 Score = 86.0 bits (94), Expect = 7e-12 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 93096 CAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTG 93155 |||||||||| || | || ||||| | ||| || | || |||||||| || | || | Sbjct 161525 CAAAGTCGGTGTGGAGGCCCTCGTCCCTTGAAATGAGTTCGTTGCTGAAGGTGAGGCCGG 161584 Query 93156 GTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTA-CCAGaaaaaaaTATA 93214 | || ||||| |||||||||| ||| || || | |||||| | |||||||| || || Sbjct 161585 GCAAGAGTCCACGTTTCTTGAACCAGAAGATGGC-GCAAAAAGAGCCAGAAAATAAGATG 161643 Query 93215 CCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 ||||| || || |||| | | | |||||||||||| Sbjct 161644 CCTTCGACTGCGCAAAATCCTAGTAGTCGTTCGGCAAAA 161682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857535403560