Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq19 91.5 1e-13 >seq19 Length=197207 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 138424 TCCTTTTGAATGTTGTAGTCG-CTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 || || || |||||||| ||| || || || || || || ||||| ||||| | | Sbjct 101828 TCTTTCTGGATGTTGTAATCGGCTAAT-GTCCGACCCTCATCCAGTTGCTTACCAGCGAA 101886 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTG 138542 || ||||||||||||||||| || |||||||||||||| ||| | || | |||| | Sbjct 101887 AATCAGACGCTGTTGGTCCGGGGGAATACCTTCTTTGTC-TTGAATCTTGGCCTTAACGG 101945 Query 138543 T-TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTA 138601 | || || | ||| || | || || |||| || | ||| || ||||||| ||||| | Sbjct 101946 TATCGACAGAGTCCGTTGGTTCGACTTCGAGAGTAATCGTCTTGCCAGTCAAGGTTTTGA 102005 Query 138602 CAAAAATCTGCAT 138614 | || || ||||| Sbjct 102006 CGAAGATTTGCAT 102018 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 138424 TCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAG 138483 ||||| ||||||||||| ||| || || | || ||||| ||||| || | | Sbjct 102056 TCCTTCTGAATGTTGTAATCGGACAACGTTCTACCTTCATCGAGCTGTTTGCCCGCGAAA 102115 Query 138484 ATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTG 138542 || ||||||||||| || ||||| || ||||| ||||| ||| | || | |||| Sbjct 102116 ATCAGACGCTGTTGATCAGGAGGGATGCCTTCCTTGTC-CTGAATCTTGGCCTTAACAAC 102174 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 || | ||||| || | |||||| || | || | ||| |||||||| | || || || Sbjct 102175 GTCAATCGTGTCCGTGGGCTCCACTTCCAGGGTAATCGTCTTACCAGTTAACGTCTTGAC 102234 Query 138603 AAAAATCTGCAT 138614 ||| |||||||| Sbjct 102235 AAAGATCTGCAT 102246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259490661680