Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 1e-13 >seq1 Length=711979 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 14979 GGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCC 15038 |||||| || || || ||||||||||| ||| | | | || || ||||||||||| Sbjct 179587 GGTAGACTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCATCCAATTGTTTGCC 179646 Query 15039 AGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTT 15098 ||| ||||||| |||||||| || ||||| |||||||| || ||| ||| || Sbjct 179647 GGCGAATATCAAGCGCTGTTGATCCGGAGGAATGCCTTCCTTATCCTGAATCTTGGCCTT 179706 Query 15099 TACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGT 15158 || | || |||| ||| | || || || | || | ||| ||||| |||||||| Sbjct 179707 AACGGTCTCGATAGAGTCGGTGGGCTCAACCTCCAGCGTCAAGGTCTTACCCGTCAGAGT 179766 Query 15159 TTTTACAAAAATTTGCAT 15176 || || || || ||||| Sbjct 179767 CTTGACGAATATCTGCAT 179784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357389957169665