Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 seq19 91.5 1e-13 >seq1 Length=711979 Score = 104 bits (114), Expect = 2e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 48575 CTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAA 48634 ||| || || || |||||||| || ||| | || | || ||||| || || ||||| || Sbjct 179593 CTCCTTCTGGATGTTGTAATCCGAAAGAGTGCGGCCATCATCCAATTGTTTGCCGGCGAA 179652 Query 48635 TATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGA 48694 ||||| ||||||||||||| |||| ||| ||||| || |||||| || || | Sbjct 179653 TATCAAGCGCTGTTGATCCGGAGGAATGCCTTCCTTATCCTGAATCTTGGCCTTAACGGT 179712 Query 48695 ACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTAC 48754 | | ||| || | | ||| ||||||| ||| | || || ||||||| ||| || || Sbjct 179713 CTCGATAGAGTCGGTGGGCTCAACCTCCAGCGTCAAGGTCTTACCCGTCAGAGTCTTGAC 179772 Query 48755 AAAAATCTGCAT 48766 || |||||||| Sbjct 179773 GAATATCTGCAT 179784 >seq19 Length=197207 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 48564 TGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGC 48623 || || ||||| || || ||||| |||||||| || | ||| | | || || | ||| Sbjct 102044 TGCAGTGTGCTTTCCTTCTGAATGTTGTAATCGGACAACGTTCTACCTTCATCGAGCTGT 102103 Query 48624 TTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTAATCTTT 48683 || || || || ||||| ||||||||||| | || | ||| |||||||| |||||| Sbjct 102104 TTGCCCGCGAAAATCAGACGCTGTTGATCAGGAGGGATGCCTTCCTTGTCCTGAATCTTG 102163 Query 48684 TGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTC 48743 || ||| | | | || | | |||||| |||| |||||||| || || || Sbjct 102164 GCCTTAACAACGTCAATCGTGTCCGTGGGCTCCACTTCCAGGGTAATCGTCTTACCAGTT 102223 Query 48744 AAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||| |||||||| Sbjct 102224 AACGTCTTGACAAAGATCTGCAT 102246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935422584487