Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq23 91.5 3e-13 >seq23 Length=179919 Score = 91.5 bits (100), Expect = 3e-13 Identities = 157/225 (70%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 25819 AAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAG 25878 ||| |||||||| |||||| | |||||||| || | ||| | || |||| ||| Sbjct 161729 AAGCGGAAGGCGGAGTGGGCAGTCAAGTGGATGAATCACAAGAACACT---TTTGCCGAA 161673 Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938 || || ||| ||| || || || |||||||| || || || ||| |||||| Sbjct 161672 CGACTACTAGGATTTTGCGCAGTCGAAGGCATCTTATTTTCTGGCTCTTTTTGCGCCATC 161613 Query 25939 TTCTGGCTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAG 25997 |||||| ||||| | | | |||| | ||||||| || ||| |||||| ||||| Sbjct 161612 TTCTGGTTCAAGAA-ACGTGGACTCTTGCCCGGCCTCACCTTCAGCAACGAACTCATTTC 161554 Query 25998 CAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACAC 26042 ||||||||||| ||||||| || |||| ||| || ||||| Sbjct 161553 AAGGGACGAGGGCCTCCACACCGACTTTGGGGCCCTCCTATACAC 161509 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928839354647360