Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 2e-15 >seq9 Length=285593 Score = 96.9 bits (106), Expect = 2e-15 Identities = 166/241 (69%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 25892 GGACAGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATC 25951 ||||| | |||| |||| || ||| | ||| | ||||| |||| || | ||| Sbjct 70914 GGACACATTAAACTCCAAGCACCATCAGATTGTACTCTTTCCATGAATAGGTCGGATATC 70855 Query 25952 CACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGA 26011 || | || |||||| ||||| |||||| ||||||||| || || ||||| || Sbjct 70854 CATAGAGCTAGAAATAAGTCTCTTGCTCTCTGTTCTTCTTTACCATGGTTCTTCCGGAGT 70795 Query 26012 TCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTT 26071 || | || || || | ||| | |||||||| || || ||||| || || || || Sbjct 70794 TCAATAAAGTCGAACACATCAGCATGCCATGGCTCCAAGTAGATTGCGAATGAGCCCTTG 70735 Query 26072 CTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGA 26131 | ||| || || ||||| ||||| || | ||| |||||||||||| | | ||||||| Sbjct 70734 CGTTTGCCACCTCCTTGGTCTACATAGCGAGCACAGTCATTGAAAACTCTGAGCATTGGA 70675 Query 26132 A 26132 | Sbjct 70674 A 70674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038553639175