Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq19 104 4e-17 >seq19 Length=197207 Score = 104 bits (114), Expect = 4e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947 ||||||||||| ||||| | | | || |||||||| |||||||||||||| | | | Sbjct 102293 ATATTATAATCCGATAACGTCCTACCCTCCTCCAATTGCTTACCAGCAAAAATCAGACGC 102352 Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007 || || ||||| || || ||||| || || || || ||| || || || | || | Sbjct 102353 TGCTGATCAGGAGGGATGCCTTCCTTGTCATGAATCTTAGCCTTCACCGTATCAACAGAA 102412 Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067 || | | ||| || || |||||||| || || |||||||| || |||| || |||||| Sbjct 102413 TCCGTAGGTTCCACCTCCAGAGTAATCGTCTTCCCAGTTAAAGTCTTAACAAAGATCTGC 102472 Query 172068 AT 172069 || Sbjct 102473 AT 102474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905130693640200