Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 2e-12 >seq9 Length=285593 Score = 89.7 bits (98), Expect = 2e-12 Identities = 273/416 (66%), Gaps = 7/416 (2%) Strand=Plus/Minus Query 155936 CCAAATAGCATAGAAA-AGGTCCCTTGC-CTTTGACTCCTCATCGCCGTGATTCTTCCGT 155993 ||| | ||| |||||| | ||| ||||| || || || || | || || |||||||| Sbjct 70855 CCATAGAGC-TAGAAATAAGTCTCTTGCTCTCTGT-TCTTCTTTACCATGGTTCTTCCGG 70798 Query 155994 AGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCA 156053 || || | || || | ||||| ||| |||||||| || || || || || Sbjct 70797 AGTTCAATAAAGTCGAACACATCAGCATGCCATGGCTCCAAGTAGATTGCGAATGAGCCC 70738 Query 156054 TTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATA 156110 || | |||||||| || |||||||| |||||| | |||||| || | ||||| Sbjct 70737 TTGCGTTTGCCACCTCCTTGGTCTACATAGCGAGCACAGTCATTGAAAACTCTGAGCATT 70678 Query 156111 GGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACA 156170 ||||| || || || | | ||||||||||| ||| | | || | | | || Sbjct 70677 GGAATGATTCCGTTCGCTCTTCCATTGGTTCCCGCAATGTAAGTTCCTGTAGCCCTGACT 70618 Query 156171 TTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACA 156230 ||||||| || |||||||| |||| |||| || | |||||| |||| Sbjct 70617 TTATGAACTGCAAGCCCAATACCTCCTGCATATTTGCTGATGAGTGCGCATGATTTTAAT 70558 Query 156231 GTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAAT 156290 || | || |||||| | ||| ||| ||| ||||| || || | || || | Sbjct 70557 GTCTCAAATATACCTGCGATACTATCCTCTGCCATTTGCAGAAGGAAACAGGAGGACATC 70498 Query 156291 TGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTT 156346 ||||||| || || || || ||||| | ||||| || |||||| |||| |||| Sbjct 70497 TGAGGTCTTGCCGTCCCTGCATTGAACAAGGTAGGGGTAGCATGAGTAAAGAACTT 70442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471808755756053