Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq19 95.1 1e-14 >seq19 Length=197207 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || |||||||| || ||||| || || || |||||| | ||| |||||| Sbjct 102247 AATGCAGATCTTTGTCAAGACGTTAACTGGTAAGACGATTACCCTGGAAGTGGAGCCCAC 102188 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | || || |||||| ||||| |||||| | || ||||| Sbjct 102187 GGACACGATTGACGTTGTTAAGGCCAAGATTCAGGACAAGGAAGGCATCCCTCCTGATCA 102128 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | || |||| ||||| |||||||| || || | ||||| || | |||||||| Sbjct 102127 ACAGCGTCTGATTTTCGCGGGCAAACAGCTCGATGAAGGTAGAACGTTGTCCGATTACAA 102068 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 |||||| || ||| || ||||| | ||| | | || |||| |||| Sbjct 102067 CATTCAGAAGGAAAGCACACTGCACCTTGTGCTCCGTTTGAGAGGTGGAA 102018 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| || |||||||| || || ||||| || ||||| ||||| || || Sbjct 102019 AATGCAAATCTTCGTCAAAACCTTGACTGGCAAGACGATTACTCTCGAAGTCGAACCAAC 101960 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || |||||| || || |||||| ||||||||||| | ||| ||| || Sbjct 101959 GGACTCTGTCGATACCGTTAAGGCCAAGATTCAAGACAAAGAAGGTATTCCCCCGGACCA 101900 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | || |||| || ||||| || ||||| || | | ||| | || |||||||| Sbjct 101899 ACAGCGTCTGATTTTCGCTGGTAAGCAACTGGATGAGGGTCGGACATTAGCCGATTACAA 101840 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||| || |||||| || | || | || || |||||| |||| || Sbjct 101839 CATCCAGAAAGAAAGCACTATTCATCTCGTCTTGAGACTGAGAGGAGG 101792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839240223217