Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq23 118 2e-20 >seq23 Length=179919 Score = 118 bits (130), Expect = 2e-20 Identities = 129/170 (76%), Gaps = 10/170 (6%) Strand=Plus/Plus Query 794361 TTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACA 794420 ||||||||| ||| ||||||||||| ||| || || ||||||| ||| |||||||| || Sbjct 161562 TTCGTTGCTGAAGGTGAGGCCGGGCAAGAGTCCACGTTTCTTGAACCAGAAGATGGCGCA 161621 Query 794421 GAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAA 794480 ||| ||| || || |||||||| ||||| ||| ||| || | || || |||||||| Sbjct 161622 AAAAGAGCCAGAAAATAAGATGCCTTCGACTGCGCAAAATCCTAGTAGTCGTTCGGCAAA 161681 Query 794481 AGTGTCCAGGCCCTCTT-TG-TTGATCCACTTCATCGCCCACTCTGCCTT 794528 ||||| |||| || || |||||||| | |||||||| ||||| Sbjct 161682 AGTGT--------TCTTGTGATTCATCCACTTGACTGCCCACTCCGCCTT 161723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916196510330891