Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq275 82.4 9e-11 >seq275 Length=98564 Score = 82.4 bits (90), Expect = 9e-11 Identities = 170/252 (67%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 146931 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCC 146990 |||||| |||||| || |||| ||| | ||| ||||| ||| |||||| ||| Sbjct 82728 GTGGTTCTTGTAGACATGAGCGTTTGCCACGAAGTGGACAAATTCCTTCGGCTTGTAGCC 82669 Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 || | ||| | | || ||| || || ||||||||||| |||||||| || | || Sbjct 82668 AGTAAGGTGCCCTATAATATAGCACAGTAGTGAGTAGCTGGCGATGTTGAACGGAATTCC 82609 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC----CCCGTCGG--C 147104 || ||| ||| || || | || || || ||| || | ||| | | |||| | Sbjct 82608 GAGTCCCCAGTCGCCTGAACGTTGATAAAGAGCGCATGAAATCTCTTTTCTCATCGGATC 82549 Query 147105 CACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCGGG 147164 |||| |||||||| || || |||||| || || || |||||| | || | || || Sbjct 82548 CACGACAAACTGGCTCAAGACGTGGCAGGGAGGTAGGGCCATGTCCTTGAGAGCGGCCGG 82489 Query 147165 GTTCCAGGCCGA 147176 ||||| ||||| Sbjct 82488 ATTCCAAGCCGA 82477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583484579301600