Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq23 116 5e-20 >seq23 Length=179919 Score = 116 bits (128), Expect = 5e-20 Identities = 286/428 (67%), Gaps = 13/428 (3%) Strand=Plus/Minus Query 1455870 GACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCAT 1455929 ||||| ||||| ||||| || | |||| || || || ||| || || || ||||| || Sbjct 161981 GACGATGAGCGACATTTTATAAGTTACGTGCTGGCATTCTTT-GCTGCTAGTGATGGAAT 161923 Query 1455930 CGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTT 1455989 || ||||| |||| |||||||| || || | || | || || | || | Sbjct 161922 AGTTCTGGAGAATTTGGCAGGCCGCTTCTTGCGTGAAATTCACATACCGGAAGTGCGCTC 161863 Query 1455990 GTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGAT 1456049 ||| || ||||| || || || |||||| ||||| || || || ||| | |||| Sbjct 161862 GTTCTATTCCTTCCAAATTGCAATGGAAAACGTCCACAGCGAGACTTATTCGTTATTGAT 161803 Query 1456050 CGACACCTACGTCAAGG---ACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACAC 1456106 || || | |||| || || || ||| | || || ||||||| | | Sbjct 161802 AGATGTGTATTTAAAGGGGAACGAGGCGGAAAAGAGCAGACTGTTCAACGCCATCCAGAG 161743 Query 1456107 GGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCT 1456166 ||| | | |||| | ||||| || ||||| | |||||||| || | || Sbjct 161742 CGTGGAGGCCGTGAAGCGGAAGGCGGAGTGGGCAGTCAAGTGGATGAATCACAAGA---- 161687 Query 1456167 CGACACTTT-GCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGG 1456224 ||||||| ||||| || || | || ||| ||| ||||| |||||||| || || || Sbjct 161686 --ACACTTTTGCCGAACGACTACTAGGATTTTGCGCAGTCGAAGGCATCTTATTTTCTGG 161629 Query 1456225 CAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTA 1456284 | ||| ||||||||||| ||| ||||||| || || ||| ||||||| | || ||| | Sbjct 161628 CTCTTTTTGCGCCATCTTCTGGTTCAAGAAACGTGGACTCTTGCCCGG-CCTCACCTTCA 161570 Query 1456285 GCAACGAA 1456292 |||||||| Sbjct 161569 GCAACGAA 161562 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177765964087978