Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Gregarina_20niphandrodes_20[genbank_20GCA_5F000223845.4_202014-04- 11] 469 sequences; 14,009,070 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq275 82.4 6e-11 >seq275 Length=98564 Score = 82.4 bits (90), Expect = 6e-11 Identities = 192/286 (67%), Gaps = 8/286 (3%) Strand=Plus/Minus Query 27091 TTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCC 27150 || ||| || | ||||||| ||||| ||| | || | ||| ||| || |||| Sbjct 82790 TTAATCACCACTTTGGGAAACGGTCTTGGCGCTCTGGTAAACTGTTCCTTGAGAGGTTGT 82731 Query 27151 ACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGG-TTCTAG 27209 | ||| | | |||||| ||||||| | ||| | ||||||||| || ||| || ||| Sbjct 82730 AAGTGGTTCTTGTAGACATGAGCGTTTGCCACGAAGTGGACAAATTCCTTCGGCTTGTAG 82671 Query 27210 CCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTAC 27269 || | | | ||| | || || || || || ||||||||||||||||| || || | Sbjct 82670 CCAG-TAAGGTGCCCTATAATATAGCACAGTAGTGAGTAGCTGGCGATGTTGAACGGAAT 82612 Query 27270 CCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCT----CCATCGC 27325 ||||| ||| ||| || || | || || || || || | |||| ||||| Sbjct 82611 TCCGAGTCCCCAGTCGCCTGAACGTTGATAAAGAGCGCATGAAATCTCTTTTCTCATCGG 82552 Query 27326 TT--ACGTAAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATG 27369 | ||| |||||| | | | ||||||| ||||| || |||||| Sbjct 82551 ATCCACGACAAACTGGCTCAAGACGTGGCAGGGAGGTAGGGCCATG 82506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369505087919939