Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq3 116 3e-21 >seq3 Length=82673 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| ||||||||||| || ||||| | ||||| |||||||| || |||||||| Sbjct 24701 CCTCCTCGTAATCTCAAAACTAAGTGCAACGTAGATTCTTTTTGGATATTGTAATCCGAA 24760 Query 118572 ATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT 118631 | || || | ||| || | ||||||||||| | || | ||||||||||| ||||| Sbjct 24761 AGGGTTCGGGAATCTTCCAATTGTTTTCCAGCAAATATTAATCGCTGCTGATCAGGAGGA 24820 Query 118632 ATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACC 118691 ||||| ||||| ||| |||||| ||| || | ||| | | || | ||| || Sbjct 24821 ATGCCTTCCTTATCTTGAATTTTGGTTTTCACATTTTCAATAATATCATTTGGCTCCACT 24880 Query 118692 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || | ||| | ||||| ||||| | || || ||||| || ||||| Sbjct 24881 TCAAGGGTTATAGTTTTACCGGTTAACGTCTTCACAAAGATTTGCAT 24927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433814627960236