Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq67 208 6e-49 >seq67 Length=41086 Score = 208 bits (230), Expect = 6e-49 Identities = 410/602 (68%), Gaps = 11/602 (2%) Strand=Plus/Plus Query 20037 AAATGAAT---TTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGA 20093 |||||||| |||| |||||||| || || | |||| | |||| | | ||||| Sbjct 28349 AAATGAATATTTTCCGTTATTAACGACAAAGAAATTGTTTTTAAGAGGCATCATAGAAGA 28408 Query 20094 GTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGT-AGAAAAAGGAGTTA 20152 || || |||||||| | |||| ||||||| | | |||| ||| ||| || Sbjct 28409 ATTGTTGTGGTTTATAAGAGGAGAAACAAATGGAAAT-ATTTTGTTAGATAAAAATGTGC 28467 Query 20153 AGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACA---GCAATGGATTTGACAACC 20209 || ||| || ||||| | | | |||||||| ||| | ||| |||||||| Sbjct 28468 GAATATGGGAAGCTAATGGAACAAGGGAATTTTTAGACAAACGAAATTTATTTGACA--- 28524 Query 20210 GTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAAT 20269 | ||| | ||||| || || | ||||||||||| |||||||||||||| || |||| Sbjct 28525 GGGAAGTGAATGATTTAGGACCCATATATGGATTTCAGTGGAGACATTTTGGTGCAGAAT 28584 Query 20270 ATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTA 20329 || ||||| | ||||| |||| || ||||||||| ||||||| ||| Sbjct 28585 ATACGAACATGCATGATGATTATACAAATAAAGGTGTTGATCAATTAAAAAATGTAATTG 28644 Query 20330 ATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAG 20389 |||||||||||| | || || | ||||||||||| ||||| || ||||| |||||| Sbjct 28645 ATTTAATTAAAAATGATCCTAAGAATAGAAGAATTATATTATGTGCATGGAATCCTAAAG 28704 Query 20390 ATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATA 20449 || | |||||| || ||||| |||||| | |||| || ||||| || | | | Sbjct 28705 ATTTAGAAAAAATGGCATTACCTCCCTGTCATGTATTATGTCAGTTTTATATTTTTGAAA 28764 Query 20450 ATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCA 20509 || ||||||| ||| |||||||||| |||| |||| |||| | || || ||||| | Sbjct 28765 ATAAATTGTCCTGTATAATGTATCAAAGATCTTGTGATTTGGGCTTAGGAGTACCTTTTA 28824 Query 20510 ATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGG 20569 | ||||| ||| | | |||| | ||||| || || ||| |||||| | Sbjct 28825 ACATTGCTTCCTATTCTATTTTTACTCACATGATAGCCCAAGTTTGTAATTTAATTCCAT 28884 Query 20570 GTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTTTAA 20629 ||| || |||| | ||||| | || |||||||| | |||||| | || | |||| Sbjct 28885 ATGAATTTATCCATATATTAGGAAATGCACATATTTATATGAATCATGTTGATCAGTTAA 28944 Query 20630 AA 20631 || Sbjct 28945 AA 28946 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399169487540935