Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 >seq3 Length=82673 Score = 104 bits (114), Expect = 2e-17 Identities = 166/237 (70%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 24823 GTTAACATCA-TGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGT 24881 ||||||| | |||| || ||||| || || |||||||| ||||| |||||| | || || Sbjct 24937 GTTAACAAAAATGCAAATCTTTGTGAAGACGTTAACCGGTAAAACTATAACCCTTGAAGT 24878 Query 24882 CGAATCGAGCGACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACC 24941 || | | || | | | |||| ||| || |||||| | || |||||| | || Sbjct 24877 GGAGCCAAATGATATTATTGAAAATGTGAAAACCAAAATTCAAGATAAGGAAGGCATTCC 24818 Query 24942 GGTTGACCAGCAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAA 25001 ||| ||||| || ||||||| ||| || |||||| ||||||||||| || | Sbjct 24817 TCCTGATCAGCAGCGATTAATATTTGCTGGAAAACAATTGGAAGATTCCCGAACCCTTTC 24758 Query 25002 CGATTACAGCATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 ||||||| || || ||||| | ||| | || ||||| || |||| || ||||| Sbjct 24757 GGATTACAATATCCAAAAAGAATCTACGTTGCACTTAGTTTTGAGATTACGAGGAGG 24701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418288792427360