Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq444 590 6e-164 seq64 190 2e-43 >seq444 Length=15175 Score = 590 bits (654), Expect = 6e-164 Identities = 1175/1717 (68%), Gaps = 40/1717 (2%) Strand=Plus/Plus Query 36937 TGATCTATAAACGCACCTCTGTCGGCTGCCATTTCTAAAATACATTTTTGAGATATCTCC 36996 ||||| ||||| || ||||| || || ||||| || | |||| |||||| ||| ||| Sbjct 4444 TGATCAATAAATGCTCCTCTATCTGCAGCCATATCAATAATATTTTTTTGTTTTATTTCC 4503 Query 36997 CAAACCGTTTTATATATTTGTTTTATATTATCTGGTAAATCT---AAATGTTGAATAGAA 37053 || || ||||| || | || |||| || ||| |||| || | || |||| | Sbjct 4504 CAGACAGTTTTGTACAATTCCTTTAAATCATCAGGTATTTCACTGATATACTGAACACTT 4563 Query 37054 CCATTATGTAACA--CAATTGTATTCTTTATGTCATTATTCCACATATTTCTACTTATTA 37111 ||||| || | || || |||| | || || || | || ||| | | |||| | || Sbjct 4564 CCATTGTG-AGCAATCAGTTGTTGT-TTCATATCTTCATCCCATAGACCTCTATCAAATA 4621 Query 37112 GTTCTCTCAATAGGTGTGGATTTACAACCTGAAAATCTCCAGATAATACTCTTCTTGTAT 37171 ||| |||| || ||||||||||| || || |||||| |||||||||||| || Sbjct 4622 AATCTTTCAACAGATGTGGATTTACTACAAAGAATTCTCCACTTAATACTCTTCTGTAAT 4681 Query 37172 ATATATTGCTAGTATATGGTTCAATGGACTCATTATTACTTAATATTTGAGATGTAGATG 37231 | || |||||||| |||||||||| || |||||||| | ||| ||||| |||||||| | Sbjct 4682 AAATGTTGCTAGTGTATGGTTCAAAAGATTCATTATTTCCTAAAATTTGTGATGTAGAAG 4741 Query 37232 CAGTAGGCATTGGTGCTATTAGAAGGCTATTTCTCAATCCATGTGTATTAATTCTCTTTT 37291 | |||||||| || |||| || | |||||| || |||||| | | ||| | | || Sbjct 4742 CCGTAGGCATAGGAGCTAATAATAAAGAATTTCTTAAACCATGTTTGATTATTTTTTGTT 4801 Query 37292 TTAGTTCATTCCAATCCCATAAATCTGTTGGGTTCTTTAA----CCACATATCATATTGT 37347 ||| ||||| ||| | ||| | || | || | |||| | |||||| ||| | || Sbjct 4802 TTAATTCATCCCAGTTCCA-ATATTTATTATCTACTTTTACATTCCACATGTCAAACTGC 4860 Query 37348 AGAATACCTTTACTCGCTGGAGAATCGTTATATGTCTCATAAGGTCCGTAAATTTTAGCT 37407 | ||||||||| || ||||| | ||| |||| ||||| | ||| | || ||||| Sbjct 4861 AAAATACCTTTGCTTGCTGGGCTTCCTTTAAATGTTTCATAGGTTCCATGAACCTTAGCC 4920 Query 37408 AGTTCGCAACTAGATTCT---AGTGCGGCATAATATATTGTTTCGAAAATTTGTATATTT 37464 | || | || |||||| | || ||| |||| || ||||| |||||| | | || Sbjct 4921 AATT--CTAC-GGATTCTTCCAAAGCTGCAAAATACATAGTTTCAAAAATTCTTTTGTTC 4977 Query 37465 AATATTTTTGCTTCTTCGCTATCGAATGCATAGCCCAATAATATAAACACATCAGCCAAA 37524 ||| ||| || || || || ||| ||| | |||||| || || |||||||| Sbjct 4978 AATTCTTTGGCATCGTCCGATTCATATGGATATCTCAATAACATGAAGGTGTCAGCCAAT 5037 Query 37525 CCCTGAACACCGATACCTATGGGTCTATGTTTCTTATTAGATCTAGACGATTCTATCACT 37584 || |||||||| || || || ||||||||| | ||| || | |||| | ||| Sbjct 5038 CCTTGAACACCAATTCCAATTGGTCTATGTCGATGATTTGAAACTTTGGCTTCTTTAACT 5097 Query 37585 GGATAATAATTGATATCTATTATTTTATTTAGATTTTTAACTAGTATTTTCGTAATTATT 37644 ||||||||||| | ||||||||||||| || |||| | | ||| | |||| ||| Sbjct 5098 GGATAATAATTTCTTTCTATTATTTTATCTAAATTTCTTGTAATAATTCTGGTAA-TATC 5156 Query 37645 CTCAA-CTTGTCGAACATAAAT--ACGTTAT----TATTAACAAATTTACTCAACGAAAT 37697 | || || | ||| |||| | || | ||| |||||||||| || | ||| Sbjct 5157 ATAAAGTTTTTTGAAATCAAATTGTCTTTTTTCCATATCTACAAATTTACATAAGGCAAT 5216 Query 37698 AGATCCTAGATTACATACAGCAACTTCATCTTCGTTACTAAATTGTATAATCTCTGTACA 37757 ||| ||| ||| || || || ||||| || || ||| || ||| || || Sbjct 5217 AGAAGCTAAATTGCAAACGGCTACTTCCCCTGGAGATGTATATTCTACAATTTCGCAGCA 5276 Query 37758 GAGATTACTCGATCTAATTGTTCCCAAATTGCTTTGATTGGATTTTTTATTACAAGAATC 37817 | ||| || || |||| |||||||| || |||||||||||| ||||||| ||| Sbjct 5277 TAAATTGCTACATTTAATAGTTCCCAAGTTTTGTTGATTGGATTTGGAGTTACAAGCATC 5336 Query 37818 TTTATATAGTATATACGGCGTTCCTTGTTCTATTTGAGCCTCGATAATAGATTTCCATAA 37877 |||||||| ||||| || |||||| |||||||||| | | ||| | |||||| Sbjct 5337 TTTATATAACATATATGGGGTTCCTGTTTCTATTTGACTTTGTAAAATGGCAAACCATAA 5396 Query 37878 ACTTCTT--GCT-TTAACGATCGCTTTAAt-ttttttCTTTGTTTCGTATTCTATATATA 37933 | |||| ||| || | || ||| | | ||||| ||| |||| | | |||| Sbjct 5397 A--TCTTGAGCTGGTACTGTTCTTTTTCCTAATCCTTCTT--CTTCATATTTTGTGTATA 5452 Query 37934 ATTTGTTAAAATCATTCCCCCATACATCGCATAATCCTGGACATTCGCATGGACACATTA 37993 |||| | ||| || | ||||| || | || || ||||||||| |||||||||| Sbjct 5453 ATTTTTCAAATTCTTCTCCCCAGGTTTCACTCAAACCAGGACATTCGTTAGGACACATTA 5512 Query 37994 GAGACCATTCTTCATCTTTTTCTACGCGTTCCATAAATAAATCAGGTACCCATAATGCAG 38053 || |||||||| || || || ||| | || |||||| | |||||| | ||| | ||| Sbjct 5513 AAGTCCATTCTTTATTTTCTTTTACTCTTTTCATAAAGAGATCAGGAATCCAGAGAGCAT 5572 Query 38054 TAAATAAATCTTTGGTTCTATATTCTTCGTTCCCTACATTCTTTCTTAAGCTTAGAAAAT 38113 |||||||||| | | ||| ||||||| || || || ||||| || || ||| | Sbjct 5573 AAAATAAATCTCTTGCTCTTAATTCTTCTTTTCCGTGGTTTTTTCTCAAATCTAAAAATT 5632 Query 38114 CGAATATATCAGCGTGCCATGGTTCTATATAAATCGACATTGCTCCTGGTCTTTTATCAC 38173 | |||| ||| | ||||| ||||| |||||||| | | | ||| |||||| | | Sbjct 5633 CAAATACATCTGAATGCCACGGTTCAATATAAATTGCAAAAGAACCTTTTCTTTTTCCGC 5692 Query 38174 CTCCCTGATTAATATATCTAACTGTGTTATTATATATTCTTAACATAGGTACTATACCAT 38233 | || |||| | ||||||| | |||| |||| | | |||||||||||||| | |||| Sbjct 5693 CCCCTTGATCTACATATCTAGCAGTGTCATTAAACACTCTTAACATAGGTATAAGCCCAT 5752 Query 38234 TAGATTTGCCGTTTATACCGGATATATAAGTACCCTTAGCTCGTATATTACTT--ATCGA 38291 | || || ||||| | || || |||| | | | ||| || || ||| | | Sbjct 5753 TGGAATTTCCGTTGGTTCCTCTAATGTAAGAATTTTGACCTCTTACAT--CTTGCACTGC 5810 Query 38292 CAATCCTATTCCACCTGCATGTTTTGAT-ATTAAAGCGCATTGTTTTAACGTATCAAATA 38350 | || || || ||||| ||||||| | || | || ||||| ||||| || ||||| | Sbjct 5811 TACACCAATACCTCCTGC-TGTTTTGCTAATCAGTGCACATTGCTTTAAAGTTTCAAAAA 5869 Query 38351 TACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAACTAGACATTTGAGGCAATG 38410 ||||||| || || || || | | || ||| ||| ||||||||| || || Sbjct 5870 TACCTTCAATGGAATCGGACTGAATGGACAATAAAAAGCAAGAAGACATTTGTGGTCTTG 5929 Query 38411 GAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAAT 38470 ||||||||| ||| || || || |||| ||||| | || |||||| |||| ||| Sbjct 5930 GAGTTCCGGAGTTGAACAAAGTCGGAGTAGCATGGGTAAAATATTTTTGGGACATCAAAT 5989 Query 38471 TATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTA 38530 ||||||||| | | | ||| | |||| | ||||||||| | ||| || ||||| | Sbjct 5990 GATATGTTTCCAATGCTCTATCAACATCATCAATGTGAATACCAATAGAAACTCTCATCA 6049 Query 38531 GCATATGTTGTGGTCTTTCTATTATTTTATTATTCTGTTTAAGTAGATACGATTTTTCTA 38590 || |||||||||||| |||| |||||| ||||| | | | ||| ||| |||||| Sbjct 6050 ACAAATGTTGTGGTCTCTCTACTATTTTGTTATTAATTCGTAACAAATAAGATCTTTCTA 6109 Query 38591 ATGTTTTTATTCCAAAATAACTATATGAATAATCTCT 38627 | ||||| | ||||||||| ||| | ||||||| Sbjct 6110 AAGTTTTGAAACCAAAATAATCATAATTAAAATCTCT 6146 >seq64 Length=40286 Score = 190 bits (210), Expect = 2e-43 Identities = 553/840 (66%), Gaps = 20/840 (2%) Strand=Plus/Minus Query 11339 TTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATAC 11398 |||||||| || ||||| | ||| || ||||| || || |||| || || ||| Sbjct 17105 TTTTGATAATCTGCAACTCTTTTTTCAAAGAAATTTGTTTTTCCTTGTAAAGAAATAAGA 17046 Query 11399 TCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAAT 11458 ||||| | ||||| || || | ||| || |||||| || ||||| | |||| Sbjct 17045 TCCATCCAACTAAATGGGTTTTTGGCATGAAAAACTTTTGAGCAGCCTAAACATTCTAAT 16986 Query 11459 AATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGA 11518 | || ||| || || ||||| ||||| || |||||||| | ||||||| || |||||| Sbjct 16985 AGTCGATCAGCAACAAATTCAATATATTGTGACATTAATCTGGAATTCATTCCAATAAGA 16926 Query 11519 TC-CACCGGAAT-AGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTA 11576 || || | ||| | | | ||| || |||||| || || || || | | || Sbjct 16925 TCACATGGTAATGATTCGCAGATAAATGATC--TTTCTACATCTACAGCTTCTTTAACTA 16868 Query 11577 TCGACGTTATAACTTCCTTAGATGGTGGATGT---AATAAATGTTTAAACATTAAACACG 11633 | || |||| | | | | || | |||||| || |||||||||| Sbjct 16867 TATTATGTACTACTTTTTCGGGTAATTTATTTTCTAATAAAC---TATACATTAAACAAT 16811 Query 11634 CAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGG 11693 |||||| || || ||||| |||||||| || | ||||||| ||| || | ||| Sbjct 16810 TAAAATCTGTGTGCAATCCTTCATCTCTACTGATCAATTCATTACTAAAAGTGAGTCCAT 16751 Query 11694 GCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTC 11753 |||| | ||||||| | ||| || || ||| ||| ||| ||| | || | Sbjct 16750 GCATTTTGTTTTGTTTTTTGAACCAGAAGATTGCACAAAAACTTCCACTAAATAGAATAC 16691 Query 11754 CCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTGCTAGATATCCATT 11813 | || ||| ||| || || | |||||| || | || || | ||||||| Sbjct 16690 CTTCAACACAAGCATTGGCAACAATTCTTTCAGCAAAAGAGTTCGTGTCATTAATCCATT 16631 Query 11814 TTCTGGCCCAATCAGCTTTCTTTTTTAC-GCATTCCATTGTTTCTATAGCGTTAAATAAA 11872 | ||||| ||||| |||||||| ||| || |||| ||||| | ||||||| Sbjct 16630 TAGCTGCCCATAATGCTTTGTTTTTTACAGCAGGT-ATATTTTCAATAGCATGAAATAAA 16572 Query 11873 TGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCTGAA 11932 | | | |||| | |||| | | ||| |||| || || ||||| || |||||||| Sbjct 16571 TTTAATCTTTCAGCTTCATCTTTAATATAATTATCAATCAACAAACTGTAAGTTTCTGAA 16512 Query 11933 TGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGTACA 11992 || |||||||| | |||||| ||||| ||| || | ||| || | | ||||| Sbjct 16511 TGGATATTTTCTACAGCTATCTGAAAAGAATAAAACTTTTTTGCTTCAGCAATTTGTACT 16452 Query 11993 TCCACATAAAATCTTTCC-GCTAAATTCTCATTTACAATACCATCACTAGATGCAAAAAA 12051 || | |||| ||| | | |||||| || ||||| |||||||||| ||||||||| Sbjct 16451 TCT-CTCAAAAACTTACAAGATAAATTTTCTAACACAATTCCATCACTAGCTGCAAAAAA 16393 Query 12052 TGCTAGTATATGTTTTATAAAGTATTTTTC---GTCTTTAGTTAATTTATCCCAATCATC 12108 ||| | | ||| ||||| || | ||| || ||||| |||| | || |||| | Sbjct 16392 TGCCAACACATGGTTTATGAAATGTTTCTCATTGTCTT---TTAAAGTTTCATAATCTTT 16336 Query 12109 TAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTATA 12168 |||||| | || ||||| | ||||||| | ||||||||| || ||| || |||||| Sbjct 16335 TAAATCACTAGACAAATCAATTTCTTCAGCAGTCCAAAAAGAAGCTTCTGCTTTTTTATA 16276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468507329881520