Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq444 450 2e-121 seq64 219 6e-52 >seq444 Length=15175 Score = 450 bits (498), Expect = 2e-121 Identities = 1131/1699 (67%), Gaps = 40/1699 (2%) Strand=Plus/Plus Query 78859 TGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCC 78918 ||||| || || ||||| || ||||||||||| | || || | |||||| |||||| Sbjct 4444 TGATCAATAAATGCTCCTCTATCTGCAGCCATATCAATAATATTTTTTTGTTTTATTTCC 4503 Query 78919 CAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTT--TG-TATTCTGAATGGAT 78975 || | |||||| || | | ||| | ||| || || | | || ||| ||||| | Sbjct 4504 CAGACAGTTTTGTACAATTCCTTTAAATCATCAGGTATTTCACTGATATACTGAACACTT 4563 Query 78976 CCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAA 79035 ||| | || || | | || || ||||||| ||||| ||| || |||| Sbjct 4564 CCATTGTGAGCAATCAGTTGTTGTTTCATATCTTCATCCCATAGACCTCTATCAAATAAA 4623 Query 79036 ACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAA 79095 || | | ||||| ||||| ||||| ||||||||| |||||||| | ||| Sbjct 4624 TCTTTCAACAGATGTGGATTTACTACAAAGAATTCTCCACTTAATACTCTTCTGTAATAA 4683 Query 79096 ATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATGCC 79155 || || || || |||||||| | |||||||||||||| |||||||| | || || ||| Sbjct 4684 ATGTTGCTAGTGTATGGTTCAAAAGATTCATTATTTCCTAAAATTTGTGATGTAGAAGCC 4743 Query 79156 GTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC--GTATGATCTGATTTTATCTT 79213 || |||||||| || | |||||| |||||| | ||| || |||| ||||| | || Sbjct 4744 GTAGGCATAGGAGCTAATAATAAAGAATTTCTTAAACCATGTTTGATT--ATTTTTTGTT 4801 Query 79214 TTAGAGATTCCCAATCCCAAAGATCAGACGGGACA---ACATTCCAAAGATCATATTGTA 79270 ||| ||||| | |||| | | || |||||||| | ||| | || | Sbjct 4802 TTAATTCATCCCAGTTCCAATATTTATTATCTACTTTTACATTCCACATGTCAAACTGCA 4861 Query 79271 GAATACCGTTACTAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTT---CCTTTTCGG 79327 |||||| || || || |||| | |||||||||| | ||| | |||| | Sbjct 4862 AAATACCTTTGCTTGCTGGGCTTCCTTTAAATGTTTCATAGGTTCCATGAACCTTA---G 4918 Query 79328 CTAATTC-ACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTG 79386 | ||||| || | | || || ||| | |||| || ||||| ||||| | || || Sbjct 4919 CCAATTCTACGGATT-CTTCCAAAGCTGCAAAATACATAGTTTCAAAAATTCTTTTGTTC 4977 Query 79387 AGATCTTGTGCTTC-TAGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTAA 79445 | |||| || || | | | ||| ||||||| | || | || || | ||| || || Sbjct 4978 AATTCTTTGGCATCGTCCGAT-TCATATGGATATCTCAATAACATGAAGGTGTCAGCCAA 5036 Query 79446 TCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAAT 79505 ||||||||||||||| || || |||||||||| | ||| |||| || |||||| || Sbjct 5037 TCCTTGAACACCAATTCCAATTGGTCTATGTCGATGATTTGAAACTTTGGCTTCTTTAAC 5096 Query 79506 AGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATC 79565 ||||||||||| | ||||| ||||||| | ||| || || | | || | ||| Sbjct 5097 TGGATAATAATTTCTTTCTATTATTTTATCTAAATTTCTTGTAATAATTCTGGTAATATC 5156 Query 79566 CTTTAGTTTGAGAAAATCAAATCGTCCATCT-----AT-TACAAACATGTTCAACGCGAC 79619 | ||||| ||||||||| ||| | | || |||||| | || || | Sbjct 5157 ATAAAGTTTTTTGAAATCAAATTGTCTTTTTTCCATATCTACAAATTTACATAAGGCAAT 5216 Query 79620 AGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCA 79679 ||| || | ||| ||||||||||| || | | | ||||| || ||||| ||| Sbjct 5217 AGAAGCTAAATTGCAAACGGCTACTTCCCCTGGAGATGTATATTCTACAATTTCGCAGCA 5276 Query 79680 GAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATC 79739 | || ||||| ||||| ||||| || ||||||||||| || |||||| ||||| Sbjct 5277 TAAATTGCTACATTTAATAGTTCCCAAGTTTTGTTGATTGGATTTGGAGTTACAAGCATC 5336 Query 79740 CTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGAC 79799 ||||| | || | || || || ||||| || ||| || || ||| || ||| | Sbjct 5337 TTTATATAACATATATGGGGTTCCTGTTTCTATTTGACTTTGTAAAATGGCAAACCATAA 5396 Query 79800 GACTCGAGCCTTTATTATAGACTTGTATCTCTT--TTCTCTTTCGTATTGTGTATATAAT 79857 || |||| || | | ||| | || | |||| ||| |||| ||| |||||| Sbjct 5397 ATCTTGAGCTGGTACTGTT--CTTTTTCCTAATCCTTCTTCTTCATATTTTGTGTATAAT 5454 Query 79858 CGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAAC 79917 ||| || || |||||||| || || ||||||||||||| ||||||||| || Sbjct 5455 TTTTCAAATTCTTCTCCCCAGGTTTCACTCAAACCAGGACATTCGTTAGGACACATTAAA 5514 Query 79918 GACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 79977 | ||| ||| || || ||||||| |||||||||||||||||||||||| ||||| | Sbjct 5515 GTCCATTCTTTATTTTCTTTTACTCTTTTCATAAAGAGATCAGGAATCCAGAGAGCATAA 5574 Query 79978 AATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 80037 |||| |||||| | ||| || || ||||| || ||| | | ||| | || | Sbjct 5575 AATAAATCTCTTGCTCTTAATTCTTCTTTTCCGTGGTTTTTTCTCAAATCTAAAAATTCA 5634 Query 80038 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCT 80097 | | ||| |||||||||||||| | || || || | | || || ||| || Sbjct 5635 AATACATCTGAATGCCACGGTTCAATATAAATTGCAAAAGAACCTTTTCTTTTTCCGCCC 5694 Query 80098 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTG 80157 || ||||||| |||||||| |||| |||| | ||||| ||||| || |||| |||||| Sbjct 5695 CCTTGATCTACATATCTAGCAGTGTCATTAAACACTCTTAACATAGGTATAAGCCCATTG 5754 Query 80158 GATGTACCATTGGTCCCGGAGATAT----AGCTTCCACTGGCACGAATATTACTAATTGA 80213 || | || ||||| || || | | || || || || || | | || Sbjct 5755 GAATTTCCGTTGGTTCCTCTAATGTAAGAATTTTGACCTCTTAC--ATCTTGC--ACTGC 5810 Query 80214 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 80273 || ||| || || ||||| |||| || | ||| ||| | ||||| || ||| | || Sbjct 5811 TACACCAATACCTCCTGCTGTTTTGCTAATCAGTGCACATTGCTTTAAAGTTTCAAAAAT 5870 Query 80274 GCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 80333 || || ||| ||| ||| | || ||| || ||||||||| | | Sbjct 5871 ACCTTCAATGGAATCGGACTGAATGGACAATAAAAAGCAAGAAGACATTTGTGGTCTTGG 5930 Query 80334 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 80393 |||||| | || || || || |||| ||| || ||||| |||||| |||| | || Sbjct 5931 AGTTCCGGAGTTGAACAAAGTCGGAGTAGCATGGGTAAAATATTTTTGGGACATCAAATG 5990 Query 80394 GTACGTCTCAATAGCTGATTCTATATC-CCATTGATGAATTCCTACCGCGACACGCATTA 80452 || || || | ||| || | ||| || || ||||| || | | || | ||| | Sbjct 5991 ATATGTTTCCAATGCTCTATCAACATCATCAATG-TGAATACCAATAGAAACTCTCATCA 6049 Query 80453 ACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCA 80512 ||| || || ||||| || || || |||||||| ||| ||||| |||||| |||| | Sbjct 6050 ACAAATGTTGTGGTCTCTCTACTATTTTGTTATTAATTCGTAACAAATAAGATCTTTCTA 6109 Query 80513 AAGTTTTAAAACCAAAATA 80531 ||||||| ||||||||||| Sbjct 6110 AAGTTTTGAAACCAAAATA 6128 >seq64 Length=40286 Score = 219 bits (242), Expect = 6e-52 Identities = 591/886 (67%), Gaps = 30/886 (3%) Strand=Plus/Minus Query 49650 TTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTT 49709 ||| | ||||||||| |||||| || || | || | |||||| || ||||| ||||| Sbjct 17124 TTGTGCCATAACTCCTGATTTTTGATAATCTGCAACTCTTTTTTCAAAGAAATTTGTTTT 17065 Query 49710 TCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttttt 49769 ||||| || || ||| ||||| || ||| || || | ||| | ||| |||| Sbjct 17064 TCCTTGTAAAGAAATAAGATCCATCCAACTAAATGGGTTTTTGGCATGAAAAACTTTTGA 17005 Query 49770 AAATCCCAA---TTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCAT 49826 | || || ||| ||| | || ||| || |||||||| |||||| | ||| | Sbjct 17004 GCAGCCTAAACATTCT--AAT-AGTCGATCAGCAACAAATTCAATATATTGTGACATTAA 16948 Query 49827 TTCACAATTCATTCCTATAAGTTTAACTGGAA--GAGCCGCAGTAAGAAATTCTTGTTCA 49884 | |||||||||| ||||| | | ||| | || ||||| | |||| | ||| Sbjct 16947 TCTGGAATTCATTCCAATAAGATCACATGGTAATGATTCGCAG--ATAAATGATCTTTCT 16890 Query 49885 ATGGATACCGCATCTGTTATAATAG-ATCTA--ACGGTTTCT--TCACTCGGTGGATGCA 49939 | ||| || ||| | | ||| || || || |||| | | | | | | Sbjct 16889 ACATCTACAGCTTCTTTAACTATATTATGTACTACTTTTTCGGGTAATTTATTTTCT--A 16832 Query 49940 ATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTA 49999 ||||| || |||| ||||| ||||| ||||| || || |||||||| || | Sbjct 16831 ATAAAC---TATACATTAAACAATTAAAATCTGTGTGCAATCCTTCATCTCTACTGATCA 16775 Query 50000 GTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACG 50059 ||| || ||| |||||||| ||||| | | ||||| | ||| || || | | Sbjct 16774 ATTCATTACTAAAAGTGAGTCCATGCATTTTGTTTTGTTTTTTGAACCAGAAGATTG-CA 16716 Query 50060 CAAATGAC--CCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCC 50117 |||| || ||| ||| | || ||||| || ||| |||||||| ||| || | Sbjct 16715 CAAAA-ACTTCCACTAAATAGAATACCTTCAACACAAGCATTGGCAACAATTCTTTCAGC 16657 Query 50118 ATAACTGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 50177 | || | |||||| ||||| || ||||| || || ||||||||| ||| Sbjct 16656 AAAAGAGTTCGTGTCATTAATCCATTTAGCTGCCCATAATGCTTTGTTTTTTACAGCAGG 16597 Query 50178 CATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATC 50237 || |||| || |||| ||| | || | ||||| |||||||| |||| |||| Sbjct 16596 TATATTTTCAATAGCATGAAATAAATTTAATCTTTCAGCTTCATCTTTAATATAATTATC 16537 Query 50238 GATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAA 50297 ||||| | ||| || |||| ||||| || ||||| | || |||||||| || || Sbjct 16536 AATCAACAAACTGTAAGTTTCTGAATGGATATTTTCTACAGCTATCTGAAAAGAATAAAA 16477 Query 50298 ACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCA-GCTAAATTTTCATTCA 50356 | | || || | ||| || |||||| | ||||| | | || | ||||||||| || Sbjct 16476 CTTTTTTGCTTCAGCAATTTGTACTTCTCT-CAAAAACTTACAAGATAAATTTTCTAACA 16418 Query 50357 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGG 50416 | ||||| ||||| ||||||||||| ||||| ||||| ||||| |||||||| || ||| Sbjct 16417 CAATTCCATCACTAGCTGCAAAAAATGCCAACACATGGTTTATGAAATGTTTCTCATTGT 16358 Query 50417 GTGTT--AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCA 50474 | || ||||| | |||| || | ||| |||| | ||| | |||||| | ||||| Sbjct 16357 CTTTTAAAGTTTCAT--AATCTTTTAAATCACTAGACAAATCAATTTCTTCAGCAGTCCA 16300 Query 50475 AAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATAT 50520 ||| || || ||||| |||||||| | || ||| | || ||||| Sbjct 16299 AAAAGAAGCTTCTGCTTTTTTATAAAAATCCCAAACTTCCGGATAT 16254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718242017552120