Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq67 96.9 5e-15 >seq67 Length=41086 Score = 96.9 bits (106), Expect = 5e-15 Identities = 141/197 (72%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 70203 ATAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCAC 70262 |||| || || || | || ||||||||||| |||||| | |||||||| |||| | Sbjct 28669 ATAGAAGAATTATATTATGTGCATGGAATCCTAAAGATTTAGAAAAAATGGCATTACCTC 28728 Query 70263 CGTGTCACTGT-TTGGCTCAGTTTTACTCGTACGATGGCAAATTGTCATGCTTAATGTAT 70321 | ||||| ||| || ||||||||| | || |||||||| || |||||||| Sbjct 28729 CCTGTCA-TGTATTATGTCAGTTTTATATTTTTGAAAATAAATTGTCCTGTATAATGTAT 28787 Query 70322 CAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTG 70381 || || | || ||||| | || ||||| ||||||||||| ||||||||| || Sbjct 28788 CAAAGATCTTGTGATTTGGGCTTAGGAGTACCTTTTAACATTGCTTCCTATTCTATTTTT 28847 Query 70382 ACGCACATGATTGCTCA 70398 || |||||||| || || Sbjct 28848 ACTCACATGATAGCCCA 28864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741031567755080