Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq23 134 2e-26 >seq23 Length=57594 Score = 134 bits (148), Expect = 2e-26 Identities = 489/756 (65%), Gaps = 22/756 (3%) Strand=Plus/Plus Query 193449 GGCATAACTGGGCAGGATGGATCTTATCTTGCCGAGTTTCTTTTGTCTAAGGGATATGAA 193508 || |||||||| |||||||| ||||||||| ||| |||||||| || || ||| Sbjct 43503 GGAATAACTGGACAGGATGGTTCTTATCTTAGTGAGCTTCTTTTGAAAAAAGGTTATATT 43562 Query 193509 GTTCATGGTATTGTAAGGAGA---AGTTCCCTAATCAATACTCATAGAATTGATCATATC 193565 |||||||| | |||| ||| ||||| | | ||||| | |||| |||||||| Sbjct 43563 GTTCATGGAGTAATAAGAAGATGTAGTTC---ATTTAATACAGTTCGAATAGATCATATA 43619 Query 193566 TATGAGAAGATCACTCTT-CATTATGGAGATCTAACTGATCCTGTAAATGTTATGGGTGT 193624 | |||||| || | || |||||||| ||| | ||| | ||| || | | | Sbjct 43620 TTTGAGAA-ATTAGAATTACATTATGGGGATGTGTTAGATAGTAGTAATATTTGTGCTTT 43678 Query 193625 CATTAGGGCAGTTGAACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGT 193684 ||| | | | | ||||| ||| || |||||| | | || ||||||||||| ||||| Sbjct 43679 AATTTGTGAAATCAAACCTAATGAAATATATAATTTAGCAGCACAAAGTCATGTAAAAGT 43738 Query 193685 TTCCTTTGAGATGCCAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACT 193744 | ||||| |||| || |||||| | | | |||| ||| | |||||| | Sbjct 43739 TAGTTTTGAAGTGCCTGAATATACTGCAGAAACAACGGGCATAGGTACTTTAAGAATATT 43798 Query 193745 TGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAG 193804 || || | ||| | | |||| ||| | ||| | || ||| | Sbjct 43799 AGAGGCCATAAAAATGAGTAAAGTTAAGAA---TGTAAAATTTTATAATGCTTCTTCTTC 43855 Query 193805 CGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACG 193864 ||| | | ||| | || | || | ||| | |||| || || ||| ||| Sbjct 43856 TGAATTATTTGGAAGAGTACAAGAAATTCCTCAGAATGAAAATACTCCTTTTTTTCCCAT 43915 Query 193865 CTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTC 193924 |||||||||| | | || || |||| ||| || | | |||||| | || || Sbjct 43916 TTCTCCTTATGCTATTGCTAAACAATATGCACATTTCATTACTATCAATTATAGAGAATC 43975 Query 193925 ATA---TGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGG 193981 ||| | || | || | |||||| | || ||||| ||| ||| |||||||| Sbjct 43976 ATACAATATGTTTTGTGTTAAT---GGTATTTTATTTAATCATGAAAGTCCTAGAAGAGG 44032 Query 193982 TGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACA 194041 || || ||||| ||||| || |||||| |||| || | || || | || | || | Sbjct 44033 AGAAACTTTTGTTACTCGAAAAATTACAAAAGGAATAGCCAAAATTT--GTAAAAATATA 44090 Query 194042 GAAGATTCTTTATCTT--GGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGAT 194099 ||| | | | | ||| || ||| | ||| | || |||||||||||||| || ||| Sbjct 44091 GAAAAGTGTATTACTTTAGGAAATATAGATGTATATAGAGATTGGGGACACGCTAAAGAT 44150 Query 194100 TATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCT 194159 ||||| | ||||||| ||||| | ||||| || || || || |||| ||| ||| | Sbjct 44151 TATGTACATGCGATGTATCTAATGCTTCAACAAGACGAGCCTGAAGATTTTGTTATTTGT 44210 Query 194160 ACAGGTGAACAGTATTCTGTTAGAG-ACTTTGTGAA 194194 || |||||| |||| ||| ||| | |||||||| Sbjct 44211 ACTAATGAACAACATTCGGTTCGAGAATTTTGTGAA 44246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807525088285480