Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq483 102 8e-17 seq444 91.5 1e-13 >seq483 Length=14038 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||||||||| |||||| | || || | ||| |||||||| Sbjct 5937 ATGCAAATTTTCGTTAAAACATTAACGGGAAAAACCATTACATTGGAAGTAGAATCATCA 5996 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || || || || | || || || || ||||||||||| || || || |||||| Sbjct 5997 GATACTATTGAAAATGTAAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGATCAA 6056 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 |||||| | || | | ||| |||||| | ||||||| || ||| | | | || || || Sbjct 6057 CAAAGATTAATCTTTGCCGGAAAACAATTAGAAGATGGAAG-AACTTTATCTGATTACAA 6115 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| || |||||||| || | || | || | ||| | |||||||| Sbjct 6116 CATCCAGAAAGAATCCACCTTACACTTAGTTTTAAGATTAAGAGGAGG 6163 Score = 102 bits (112), Expect = 8e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || ||||||||||| |||||| | || || | ||| | |||||| Sbjct 6165 ATGCAAATTTTCGTTAAAACATTAACGGGAAAAACCATTACATTGGAAGTGGAATCATCA 6224 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || || || ||||||||||| || || || |||||| Sbjct 6225 GACACTATTGAAAATGTAAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGATCAA 6284 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGC-GACTATAA 26947 |||||| | || | | || |||||| | ||||| | || ||| | | | || || || Sbjct 6285 CAAAGATTAATCTTTGCTGGAAAACAATTGGAAGACGGAAG-AACTTTATCTGATTACAA 6343 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 ||| ||||||||||| || | || | || | ||| | |||||||||| Sbjct 6344 CATCCAAAAAGAATCCACCTTACACTTAGTTTTAAGATTAAGAGGAGGAA 6393 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || |||||||||||| | || ||| | ||| | |||||| Sbjct 5709 ATGCAGATTTTCGTTAAGACCTTAACTGGAAAAACCATTACCTTGGAAGTGGAATCATCA 5768 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||| || || | || || || || ||||||||||| || || || |||||| Sbjct 5769 GACACTATTGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGAATTCCACCAGATCAA 5828 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 |||||| | || | | || |||||| | ||||| | |||| | || |||||| Sbjct 5829 CAAAGATTAATCTTTGCTGGAAAACAATTGGAAGACGGAAGAACTTTATTGGATTATAAC 5888 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| ||| | || | || | ||| | ||||| || Sbjct 5889 ATCCAGAAAGAATCCACTTTACACTTAGTTTTAAGATTAAGAGGTGG 5935 >seq444 Length=15175 Score = 91.5 bits (100), Expect = 1e-13 Identities = 572/902 (63%), Gaps = 26/902 (3%) Strand=Plus/Plus Query 147501 TTACTAGTAAACGGCTCGAACGACTCGTTGTTACCTAGAATCTGTGCAGTCGTTGCCGTC 147560 || ||||| | || || || || || || || |||| ||| |||| || | ||||| Sbjct 4687 TTGCTAGTGTATGGTTCAAAAGATTCATTATTTCCTAAAATTTGTGATGTAGAAGCCGTA 4746 Query 147561 GGCATGTAAGCAATCAATAATGAATTGCGTAAGCCGTGCATAGCCATTTCTCGCTTAAGC 147620 ||||| ||| | ||||| ||||| | ||| || || | |||| | | || | Sbjct 4747 GGCATAGGAGCTAATAATAAAGAATTTCTTAAACCATGTTTGATTATTTTTTGTTTTAAT 4806 Query 147621 TCGTCCCAGTTCCAAAGATCATTCGATTGGTTAATATTCCACAAATCAAACTGTAAAAGT 147680 || |||||||||||| | ||| | || | |||||||| |||||||| |||| Sbjct 4807 TCATCCCAGTTCCAATATTTATTATCTACTTTTACATTCCACATGTCAAACTGCAAAATA 4866 Query 147681 CCACAACTTGCAGGGCTTCCATCGTAAGAATCGTATGTTCCGTGCAGTTTAGCTAGTTCG 147740 || ||||| |||||||| | | | || || ||||| || | ||||| | ||| Sbjct 4867 CCTTTGCTTGCTGGGCTTCCTTTAAATGTTTCATAGGTTCCATGAACCTTAGCCAATTC- 4925 Query 147741 ATACTTTGACTT--AGTGCACCATAATAAATAGTTTCTGAAATCTTTTTATTTAAATCTC 147798 ||| ||| | || || |||| |||||||| |||| |||| || || ||| Sbjct 4926 -TACGGATTCTTCCAAAGCTGCAAAATACATAGTTTCAAAAATTCTTTTGTTCAATTCTT 4984 Query 147799 TAGCCTCTTGGCTGTCGTAGGGCATATC-CAAAATGGCGAACGTATCCGCAAGTCCTTGA 147857 | || || | || || || ||||| ||| | ||| || || || | ||||||| Sbjct 4985 TGGCATCGTCCGATTCATATGG-ATATCTCAATAACATGAAGGTGTCAGCCAATCCTTGA 5043 Query 147858 ATACCGATACCGATGGGTCGGTGTCTGAAATTCGATGCTTGAGCGCTAGCCAAC-GGATA 147916 | ||| || || || |||| |||| ||| || ||| || | ||| ||||| Sbjct 5044 ACACCAATTCCAATTGGTCTATGTCGATGATTTGAAACTTTGGC-TTCTTTAACTGGATA 5102 Query 147917 AAAATTCAAGTCGATAATTTTATTGAGATTATTGGTAACCACTCTAGATACATTGTAGAG 147976 | |||| || || ||||||| | ||| | |||| | ||| | | || || || Sbjct 5103 ATAATTTCTTTCTATTATTTTATCTAAATTTCTTGTAATAATTCTGGTAATATCATAAAG 5162 Query 147977 CGACTTAAAGTCGAA---GCTTTTAAACTGTTTATTGGCAAAATTATTTACGGCAATCGA 148033 || || || || ||||| | ||| |||| ||| || |||||| || Sbjct 5163 TTTTTTGAAATCAAATTGTCTTTT---TTCCATATCTACAAATTTACATAAGGCAATAGA 5219 Query 148034 GGCCAAGTTACACACGGCCGTTTCTCGATTGTCG--CTATATTGAACGATTTCGGCACAC 148091 || || || || ||||| ||| | || | |||||| || |||||| || Sbjct 5220 AGCTAAATTGCAAACGGCTACTTCCC--CTGGAGATGTATATTCTACAATTTCGCAGCAT 5277 Query 148092 AGATTGCTGTTTCGAATCACTCCCTCGtttttttGATTATTTTTATTGTTAACGTGATCT 148151 | |||||| | ||| |||| ||||| |||||| ||| |||| |||| Sbjct 5278 AAATTGCTACATTTAATAGTTCCCAAGTTTTGTTGATTGGATTTGGAGTTACAAGCATCT 5337 Query 148152 TTAAACATCATGTATGGAGCTCCGGTCTCGACTTGAGTCTCAATAAT--TTTTCTATGAA 148209 ||| | | ||| ||||| | ||| || || | |||| | | | ||| | || | Sbjct 5338 TTATATAACATATATGGGGTTCCTGTTTCTATTTGACTTTGTAAAATGGCAAACCAT--A 5395 Query 148210 GATCTAAAGCCGAAATTTGTTTTTTAAACT-TGCCTTCGGCCTCGTAATTTTCGTAAAGG 148268 |||| ||| | | |||| ||| || ||||| | || || ||| ||| | Sbjct 5396 AATCTTGAGCTGGTA-CTGTTCTTTTTCCTAATCCTTCTTCTTCATATTTTGTGTATAAT 5454 Query 148269 TCCTCGAATTCTTGGCCATAGCAATCGTTTAAACCGGGACACTCGTCGGGGCACATCAAT 148328 | || ||||||| || || || | ||||| ||||| |||| || ||||| || Sbjct 5455 TTTTCAAATTCTTCTCCCCAGGTTTCACTCAAACCAGGACATTCGTTAGGACACATTAAA 5514 Query 148329 GACCATTTCCCTCCTGTC-TTTACCCTCTTCATAAACAGATCAGGTGTCCACATGGCAAA 148387 | ||| ||| | | || ||||| || |||||||| |||||||| |||| | ||| | Sbjct 5515 GTCCA-TTCTTTATTTTCTTTTACTCTTTTCATAAAGAGATCAGGAATCCAGAGAGCATA 5573 Query 148388 AA 148389 || Sbjct 5574 AA 5575 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478644551875760