Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq444 194 4e-44 seq64 147 6e-30 seq67 120 8e-22 >seq444 Length=15175 Score = 194 bits (214), Expect = 4e-44 Identities = 541/821 (66%), Gaps = 12/821 (1%) Strand=Plus/Minus Query 363454 CCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCA--TTGCCCGGATGTTGATGCCG 363511 || || ||| |||| ||| | ||| |||||||||| || ||| ||||||||| | Sbjct 6062 CCACAACATTTGTTGATGAGAGTTTCTATTGGTATTCACATTGAT--GATGTTGATAGAG 6005 Query 363512 CGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TATTC-ACGCACGCCACGCCAACAAT 363569 | | ||||||||| | || | || | |||| || || || || || || | Sbjct 6004 CATTGGAAACATATCA--TTTGATGTCCCAAAAATATTTTACCCATGCTACTCCGACTTT 5947 Query 363570 GTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGA 363629 || ||| | ||||||| | ||||| ||||||||||||||| | | || || Sbjct 5946 GTTCAACTCCGGAACTCCAAGACCACAAATGTCTTCTTGCTTTTTATTGTCCATTCAGTC 5887 Query 363630 CGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGC 363689 ||||||||| || ||||| ||||| || | ||| | ||||| || ||| ||| | || Sbjct 5886 CGATTCCATTGAAGGTATTTTTGAAACTTTAAAGCAATGTGCACTGATTAGCAAAACAGC 5827 Query 363690 AGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAGTTACATTCGCGGCAC 363749 ||| || ||||||||| | | || |||| | | || || ||||||| | || || Sbjct 5826 AGGAGGTATTGGTGTAGCAGTGCAAGATGTAAGAGGTCAAAATTCTTACATTAGAGGAAC 5767 Query 363750 AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTA 363809 ||| | || |||||||| | || ||| | | |||||| | | ||||| || || Sbjct 5766 CAACGGAAATTCCAATGGGCTTATACCTATGTTAAGAGTGTTTAATGACACTGCTAGATA 5707 Query 363810 CGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCA 363869 || || || || || ||||| | ||||| | ||||| || ||| | || || || Sbjct 5706 TGTAGATCAAGGGGGCGGAAAAAGAAAAGGTTCTTTTGCAATTTATATTGAACCGTGGCA 5647 Query 363870 TGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGC 363929 | | ||| | ||||| ||| | || | | |||||| |||||||| ||||| | || Sbjct 5646 TTCAGATGTATTTGAATTTTTAGATTTGAGAAAAAACCACGGAAAAGAAGAATTAAGAGC 5587 Query 363930 ACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCAGG 363989 | | ||| | || ||||| || ||| || |||| | |||||||| | || | | | Sbjct 5586 AAGAGATTTATTTTATGCTCTCTGGATTCCTGATCTCTTTATGAAAAGAGTAAAAGAAAA 5527 Query 363990 TAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGA 364049 ||| | ||| | | | || || |||||||||| ||| | || ||||| || Sbjct 5526 TAAAGAATGGACTTTAATGTGTCCTAACGAATGTCCTGGTTTGAGTGAAACCTGGGGAGA 5467 Query 364050 CGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGA-AAGGCTCGTAAG-ACAATT 364107 || | || ||||| ||| |||||| || ||| ||| ||| ||| | Sbjct 5466 AGAATTTGAAAAATTATACACAAAATATGAAGAAGAAGGATTAGG--AAAAAGAACAGTA 5409 Query 364108 CCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTAT 364167 || || || | ||||||||||||| | | || || || |||||||| || ||| Sbjct 5408 CCAGCTCAAGATTTATGGTTTGCCATTTTACAAAGTCAAATAGAAACAGGAACCCCATAT 5349 Query 364168 ATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAG 364227 ||||| || |||||| | || ||| ||| ||||| || || || | || || ||| | Sbjct 5348 ATGTTATATAAAGATGCTTGTAACTCCAAATCCAATCAACAAAACTTGGGAACTATTAAA 5289 Query 364228 CAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCC 364268 ||||| |||| ||| ||| | ||||| || |||| Sbjct 5288 TGTAGCAATTTATGCTGCGAAATTGTAGAATATACATCTCC 5248 >seq64 Length=40286 Score = 147 bits (162), Expect = 6e-30 Identities = 342/506 (68%), Gaps = 11/506 (2%) Strand=Plus/Plus Query 22450 TGGGC-GCTGAAATGGATGAACAAT--GAACGTTCATTCGCGGAACGTCTTATTGCATTT 22506 ||||| ||| |||||||| || | |||| || || || ||| | || |||| | Sbjct 16621 TGGGCAGCT-AAATGGATTAATGACACGAAC--TCTTTTGCTGAAAGAATTGTTGCCAAT 16677 Query 22507 GCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaa 22566 ||| |||||||| ||| | ||| |||| |||||||||||||| ||| | |||||| Sbjct 16678 GCTTGTGTTGAAGGTATTCTATTTAGTGGAAGTTTTTGTGCAATCTTCTGGTTCAAAAAA 16737 Query 22567 CGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTT 22626 | | |||| || || || ||| ||||| || || || ||||||| || | Sbjct 16738 CAAAACAAAATGCATGGACTCACTTTTAGTAATGAATTGATCAGTAGAGATGAAGGATTG 16797 Query 22627 CATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATGAA 22686 || || |||||| ||| | | ||| | | || | ||||| | || | || Sbjct 16798 CACACAGATTTTAATTGTTTAATGTATAGTT-TATTAGAAA--ATAAATTACCCGAAAAA 16854 Query 22687 ACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCG 22746 |||| | |||| ||| | | || || || | ||| | |||||| ||||| | Sbjct 16855 GTAGTACATAATATAGTTAAAGAAGCTGTAGATGTAGAAAGATCATTTATCTGCGAATCA 16914 Query 22747 TTACCA-GTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGT 22805 |||||| || | ||| ||||| || ||| || || |||| ||||||| ||||||| Sbjct 16915 TTACCATGTGA-TCTTATTGGAATGAATTCCAGATTAATGTCACAATATATTGAATTTGT 16973 Query 22806 TGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTTAATCCATT 22865 ||| ||||| |||||| | | || | |||| || | | | | || ||||| Sbjct 16974 TGCTGATCGACTATTAGAATGTTTAGGCTGCTCAAAAGTTTTTCATGCCAAAAACCCATT 17033 Query 22866 TGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGG 22925 | |||||||| |||||||| | ||||||| || |||||||| ||||||||||||| Sbjct 17034 TAGTTGGATGGATCTTATTTCTTTACAAGGAAAAACAAATTTCTTTGAAAAAAGAGTTGC 17093 Query 22926 TGAATACCAAAAAGCAGGTGTTATGG 22951 || || |||||| |||| ||||||| Sbjct 17094 AGATTATCAAAAATCAGGAGTTATGG 17119 >seq67 Length=41086 Score = 120 bits (132), Expect = 8e-22 Identities = 290/432 (67%), Gaps = 8/432 (2%) Strand=Plus/Plus Query 111360 GAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAATGCAAATGAACTTGC-AGCAAAAAA 111418 |||||| | |||||||||| | ||| ||||||| |||| | ||| || ||||| Sbjct 28404 GAAGAATTGTTGTGGTTTATAAGAGGAGAAACAAATGGAAAT-ATTTTGTTAGATAAAAA 28462 Query 111419 TGTAAAAATTTGGGATGGAAATGGATCACGTGACTTTCTAGATTCAGTTGGTCTTGTCGA 111478 ||| ||| ||||| | |||||| || | || ||| |||| | | | | || Sbjct 28463 TGTGCGAATATGGGAAGCTAATGGAACAAGGGAATTTTTAGACAAACGAAATTTATTTGA 28522 Query 111479 CAACGAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGA 111538 || |||| |||| | ||||| | || |||||||| ||| | || ||||||||||| Sbjct 28523 CAGGGAAGTGAATGATTTAGGACCCATATATGGATTTCAGTGGAGACATTTTGGTGCAGA 28582 Query 111539 CTACAAAACCATGCACGAC--TCATATGATTCACAGGGAACTGATCAATTACAGAATGTC 111596 || | | |||||| || | ||| | | | | | |||||||||| | ||||| Sbjct 28583 ATATACGAACATGCATGATGATTATACAAATAAAGGTGT--TGATCAATTAAAAAATGTA 28640 Query 111597 ATTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCA 111656 |||||| |||||| || | || | | | | ||||| | |||||||||| || Sbjct 28641 ATTGATTTAATTAAAAATGATCCTAAGAATAGAAGAATTATATTATGTGCATGGAATCCT 28700 Query 111657 AATGCATTGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACAC 111716 || | || |||||||||||| | || || |||||| | | || ||||||||| | Sbjct 28701 AAAGATTTAGAAAAAATGGCATTACCTCCCTGTCATGTATTATGTCAGTTTTATATTTTT 28760 Query 111717 GACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTT-GGTGTTCC 111775 || | | || || ||||||||| ||||| |||| |||| ||| || || || Sbjct 28761 GAAAATAAATTGTCCTGTATAATGTATCAAAGATCTTGTGAT-TTGGGCTTAGGAGTACC 28819 Query 111776 GTTTAATATTGC 111787 ||||| ||||| Sbjct 28820 TTTTAACATTGC 28831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303303786232706