Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Haemoproteus_20tartakovskyi_20[genbank_20GCA_5F001625125.1_202016- 04-24] 2,983 sequences; 23,209,007 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq483 87.8 2e-12 >seq483 Length=14038 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCTCATGGTGCGCGAGTCCTC 131084 ||||| |||| ||| || || || || ||||||||||| | | | | | | | || || Sbjct 6145 ACTAAGTGTAAGGTGGATTCTTTCTGGATGTTGTAATCAGATAAAGTTCTTCCA-TCTTC 6087 Query 131085 TAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGT 131144 || || || || || ||||||| | || || || || || |||||||||||||| Sbjct 6086 TAATTGTTTTCCGGCAAAGATTAATCTTTGTTGATCTGGTGGAATTCCTTCTTTGTCTTG 6027 Query 131145 GATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTT 131204 |||||| ||| | | || | |||||| | || || | || | |||| |||||| Sbjct 6026 GATTTTGGCCTTTACATTTTCAATAGTATCTGATGATTCTACTTCCAATGTAATGGTTTT 5967 Query 131205 ACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || |||| ||||| |||||||| ||||| Sbjct 5966 TCCCGTTAATGTTTTAACGAAAATTTGCAT 5937 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 ||||| |||| ||| || || ||||| ||||||||||| | || | ||| || Sbjct 6373 ACTAAGTGTAAGGTGGATTCTTTTTGGATGTTGTAATCAGATAAAGTTCTTCCGTCTTCC 6314 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 | || || || || ||||||| | || || || || || |||||||||||||| | Sbjct 6313 AATTGTTTTCCAGCAAAGATTAATCTTTGTTGATCTGGTGGAATTCCTTCTTTGTCTTGG 6254 Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205 ||||| ||| | | || | ||| || | || || | || | |||| |||||| Sbjct 6253 ATTTTGGCCTTTACATTTTCAATAGTGTCTGATGATTCCACTTCCAATGTAATGGTTTTT 6194 Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || |||| ||||| |||||||| ||||| Sbjct 6193 CCCGTTAATGTTTTAACGAAAATTTGCAT 6165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471995199822720